3coq
From Proteopedia
(Difference between revisions)
												
			
			| Line 1: | Line 1: | ||
| ==Structural Basis for Dimerization in DNA Recognition by Gal4== | ==Structural Basis for Dimerization in DNA Recognition by Gal4== | ||
| - | <StructureSection load='3coq' size='340' side='right' caption='[[3coq]], [[Resolution|resolution]] 2.40Å' scene=''> | + | <StructureSection load='3coq' size='340' side='right'caption='[[3coq]], [[Resolution|resolution]] 2.40Å' scene=''> | 
| == Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3coq]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[3coq]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Baker's_yeast Baker's yeast]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3COQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3COQ FirstGlance]. <br> | 
| </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GAL4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id= | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GAL4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Baker's yeast])</td></tr> | 
| <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3coq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3coq OCA], [http://pdbe.org/3coq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3coq RCSB], [http://www.ebi.ac.uk/pdbsum/3coq PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3coq ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3coq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3coq OCA], [http://pdbe.org/3coq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3coq RCSB], [http://www.ebi.ac.uk/pdbsum/3coq PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3coq ProSAT]</span></td></tr> | ||
| </table> | </table> | ||
| Line 14: | Line 14: | ||
| Check<jmol> | Check<jmol> | ||
|   <jmolCheckbox> |   <jmolCheckbox> | ||
| - |     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/co/3coq_consurf.spt"</scriptWhenChecked> | + |     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/co/3coq_consurf.spt"</scriptWhenChecked> | 
|     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
|     <text>to colour the structure by Evolutionary Conservation</text> |     <text>to colour the structure by Evolutionary Conservation</text> | ||
| Line 31: | Line 31: | ||
| ==See Also== | ==See Also== | ||
| + | *[[Gal3-Gal80-Gal4|Gal3-Gal80-Gal4]] | ||
| *[[User:Wayne Decatur/Gal 4|User:Wayne Decatur/Gal 4]] | *[[User:Wayne Decatur/Gal 4|User:Wayne Decatur/Gal 4]] | ||
| == References == | == References == | ||
| Line 36: | Line 37: | ||
| __TOC__ | __TOC__ | ||
| </StructureSection> | </StructureSection> | ||
| - | [[Category:  | + | [[Category: Baker's yeast]] | 
| + | [[Category: Large Structures]] | ||
| [[Category: Fitzgerald, M X]] | [[Category: Fitzgerald, M X]] | ||
| [[Category: Harper, S]] | [[Category: Harper, S]] | ||
Revision as of 07:54, 24 July 2019
Structural Basis for Dimerization in DNA Recognition by Gal4
| 
 | |||||||||||
Categories: Baker's yeast | Large Structures | Fitzgerald, M X | Harper, S | Hong, M | Luo, C | Speicher, D W | Activator | Carbohydrate metabolism | Dna-binding | Galactose metabolism | Helix bundle | Metal-binding | Nucleus | Phosphoprotein | Protein-dna complex | Transcription | Transcription regulation | Transcription-dna complex | Zinc binuclear cluster

