Heme oxygenase

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For additional information, See: [[Cancer]] <br />
For additional information, See: [[Cancer]] <br />
For additional information, See: [[NADPH Cytochrome P450 Oxidoreductase]] <br />
For additional information, See: [[NADPH Cytochrome P450 Oxidoreductase]] <br />
 +
 +
==3D structures of heme oxygenase==
 +
[[Heme oxygenase 3D structures]]
 +
</StructureSection>
</StructureSection>
==3D structures of heme oxygenase==
==3D structures of heme oxygenase==
Line 46: Line 50:
*Heme oxygenase
*Heme oxygenase
-
**[[2z68]], [[1wzd]], [[1wzf]], [[1wzg]], [[1iw0]], [[1iw1]], [[4goh]] – CdHO – ''Coreynebacterium diphtheriae''<BR />
+
**[[1n45]], [[1n3u]] – hHO-1 - human<BR />
-
**[[1wnv]], [[1wnw]], [[1wnx]] – CdHO (mutant) <BR />
+
**[[1xk1]], [[1xk0]], [[1xjz]], [[1xk2]], [[1oyk]], [[1oyl]], [[1oze]], [[1ozr]], [[4wd4]] - hHO-1 (mutant) <BR />
**[[1ubb]], [[1dve]], [[1dvg]] – rHO – rat<BR />
**[[1ubb]], [[1dve]], [[1dvg]] – rHO – rat<BR />
**[[1irm]] – rHO-apo<BR />
**[[1irm]] – rHO-apo<BR />
**[[4mec]] – rHO-1 Zn containing<br />
**[[4mec]] – rHO-1 Zn containing<br />
**[[3gas]] – HO – ''Helicobacter pylori''<BR />
**[[3gas]] – HO – ''Helicobacter pylori''<BR />
-
**[[1xk1]], [[1xk0]], [[1xjz]], [[1xk2]], [[1oyk]], [[1oyl]], [[1oze]], [[1ozr]], [[4wd4]] - hHO-1 (mutant) – human<BR />
 
-
**[[1n45]], [[1n3u]] – hHO-1<BR />
 
**[[1we1]] – HO-1 – ''Cyanobacterium synechocystis''<BR />
**[[1we1]] – HO-1 – ''Cyanobacterium synechocystis''<BR />
**[[1p3t]], [[1j77]] – NmHO-1 – ''Nisseria meningitides''<br />
**[[1p3t]], [[1j77]] – NmHO-1 – ''Nisseria meningitides''<br />
**[[5kzl]] – HO (mutant) – ''Leptospira interrogans''<br />
**[[5kzl]] – HO (mutant) – ''Leptospira interrogans''<br />
 +
**[[2z68]], [[1wzd]], [[1wzf]], [[1wzg]], [[1iw0]], [[1iw1]], [[4goh]] – CdHO – ''Coreynebacterium diphtheriae''<BR />
 +
**[[1wnv]], [[1wnw]], [[1wnx]] – CdHO (mutant) <BR />
*Heme oxygenase complex with NO
*Heme oxygenase complex with NO
-
**[[1j02]] - rHO-1 + NO<BR />
 
**[[1kx3]], [[1ozl]], [[1ozw]], [[1xk3]] - hHO-1 (mutant) + NO<BR />
**[[1kx3]], [[1ozl]], [[1ozw]], [[1xk3]] - hHO-1 (mutant) + NO<BR />
 +
**[[1j02]] - rHO-1 + NO<BR />
**[[1p3u]] - NmHO-1 + NO<BR />
**[[1p3u]] - NmHO-1 + NO<BR />
*Heme oxygenase with verdoheme
*Heme oxygenase with verdoheme
-
**[[3moo]] – CdHO + verdoheme-N3<BR />
 
-
**[[2zvu]] – rHO-1 + verdoheme<BR />
 
**[[1twn]] - hHO-1 + verdoheme<BR />
**[[1twn]] - hHO-1 + verdoheme<BR />
**[[1twr]] - hHO-1 + verdoheme-NO<BR />
**[[1twr]] - hHO-1 + verdoheme-NO<BR />
 +
**[[2zvu]] – rHO-1 + verdoheme<BR />
 +
**[[3moo]] – CdHO + verdoheme-N3<BR />
*Heme oxygenase complex with reaction products
*Heme oxygenase complex with reaction products
-
**[[1p3v]] - NmHO-1 + CO<BR />
 
-
**[[1ulx]], [[1ix4]] - rHO-1 + CO<BR />
 
-
**[[1j2c]] - rHO-1 + biliverdine<BR />
 
**[[1s8c]] - hHO-1 + biliverdine<br />
**[[1s8c]] - hHO-1 + biliverdine<br />
**[[5btq]] – hHO-1 (mutant) + biliverdine<br />
**[[5btq]] – hHO-1 (mutant) + biliverdine<br />
 +
**[[1ulx]], [[1ix4]] - rHO-1 + CO<BR />
 +
**[[1j2c]] - rHO-1 + biliverdine<BR />
**[[4gpc]], [[4gpf]], [[4gph]] - CdHO + biliverdine<br />
**[[4gpc]], [[4gpf]], [[4gph]] - CdHO + biliverdine<br />
 +
**[[1p3v]] - NmHO-1 + CO<BR />
*Heme oxygenase binary complexes
*Heme oxygenase binary complexes
-
**[[3i8r]], [[3i9t]] – CdHO + DTT<BR />
+
**[[3k4f]], [[3hok]], [[3czy]], [[3tgm]] – hHO-1 + azole derivative<BR />
-
**[[1v8x]] – CdHO + O2<BR />
+
**[[1ni6]] – hHO-1 + trehalose<BR />
 +
**[[1s13]] - hHO-1 + 2-phenylheme<BR />
 +
**[[1t5p]] - hHO-1 + 12-phenylheme<br />
 +
**[[6eha]] – hHO-1 + inhibitor<br />
**[[4g7l]] – rHO-1 + O2<br />
**[[4g7l]] – rHO-1 + O2<br />
**[[4g7p]], [[4g7t]], [[4g7u]], [[4g8p]], [[4g8u]], [[4g8w]], [[4g98]], [[4g99]] – rHO-1 + CO<br />
**[[4g7p]], [[4g7t]], [[4g7u]], [[4g8p]], [[4g8u]], [[4g8w]], [[4g98]], [[4g99]] – rHO-1 + CO<br />
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**[[1vgi]] - rHO-1 + Xe<BR />
**[[1vgi]] - rHO-1 + Xe<BR />
**[[2dy5]] - rHO-1 + azole derivative<BR />
**[[2dy5]] - rHO-1 + azole derivative<BR />
-
**[[3k4f]], [[3hok]], [[3czy]], [[3tgm]] – hHO-1 + azole derivative<BR />
+
**[[3wkt]] – rHO-1 (mutant) + NADPH-cytochrome P450 reductase<br />
-
**[[1ni6]] – hHO-1 + trehalose<BR />
+
-
**[[1s13]] - hHO-1 + 2-phenylheme<BR />
+
-
**[[1t5p]] - hHO-1 + 12-phenylheme<br />
+
**[[2zdo]] – SaHO + hemin – ''Staphylococcus aureus''<br />
**[[2zdo]] – SaHO + hemin – ''Staphylococcus aureus''<br />
**[[2zdp]] – SaHO + Co<br />
**[[2zdp]] – SaHO + Co<br />
**[[3lgm]], [[3lgn]], [[3qgp]], [[4fnh]] – SaHO + heme<br />
**[[3lgm]], [[3lgn]], [[3qgp]], [[4fnh]] – SaHO + heme<br />
**[[4fni]] – SaHO + heme + CN<br />
**[[4fni]] – SaHO + heme + CN<br />
-
**[[3wkt]] – rHO-1 (mutant) + NADPH-cytochrome P450 reductase<br />
+
**[[3i8r]], [[3i9t]] – CdHO + DTT<BR />
 +
**[[1v8x]] – CdHO + O2<BR />
*Heme oxygenase 2
*Heme oxygenase 2

Revision as of 09:03, 24 July 2019

Rat heme oxygenase complex with imidazole derivative and Cl- ion (green) (PDB entry 2dy5)

Drag the structure with the mouse to rotate

3D structures of heme oxygenase

Updated on 24-July-2019






References

  1. 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 Sugishima M, Higashimoto Y, Oishi T, Takahashi H, Sakamoto H, Noguchi M, Fukuyama K. X-ray crystallographic and biochemical characterization of the inhibitory action of an imidazole-dioxolane compound on heme oxygenase. Biochemistry. 2007 Feb 20;46(7):1860-7. Epub 2007 Jan 25. PMID:17253780 doi:10.1021/bi062264p
  2. 2.0 2.1 Lad L, Ortiz de Montellano PR, Poulos TL. Crystal structures of ferrous and ferrous-NO forms of verdoheme in a complex with human heme oxygenase-1: catalytic implications for heme cleavage. J Inorg Biochem. 2004 Nov;98(11):1686-95. PMID:15522396 doi:10.1016/j.jinorgbio.2004.07.004
  3. Otterbein LE, Soares MP, Yamashita K, Bach FH. Heme oxygenase-1: unleashing the protective properties of heme. Trends Immunol. 2003 Aug;24(8):449-55. PMID:12909459
  4. 4.0 4.1 Caughey WS, Smythe GA, O'Keeffe DH, Maskasky JE, Smith MI. Heme A of cytochrome c oxicase. Structure and properties: comparisons with hemes B, C, and S and derivatives. J Biol Chem. 1975 Oct 10;250(19):7602-22. PMID:170266
  5. Bonkovsky HL, Healey JF, Pohl J. Purification and characterization of heme oxygenase from chick liver. Comparison of the avian and mammalian enzymes. Eur J Biochem. 1990 Apr 20;189(1):155-66. PMID:2158889
  6. 6.0 6.1 6.2 6.3 6.4 6.5 Rahman MN, Vlahakis JZ, Szarek WA, Nakatsu K, Jia Z. X-ray Crystal Structure of Human Heme Oxygenase-1 in Complex with 1-(Adamantan-1-yl)-2-(1H-imidazol-1-yl)ethanone: A Common Binding Mode for Imidazole-Based Heme Oxygenase-1 Inhibitors. J Med Chem. 2008 Sep 18. PMID:18798608 doi:10.1021/jm800505m
  7. 7.0 7.1 Maines MD. Heme oxygenase: function, multiplicity, regulatory mechanisms, and clinical applications. FASEB J. 1988 Jul;2(10):2557-68. PMID:3290025
  8. 8.0 8.1 Lee TS, Chau LY. Heme oxygenase-1 mediates the anti-inflammatory effect of interleukin-10 in mice. Nat Med. 2002 Mar;8(3):240-6. PMID:11875494 doi:10.1038/nm0302-240
  9. Evans JP, Niemevz F, Buldain G, de Montellano PO. Isoporphyrin intermediate in heme oxygenase catalysis. Oxidation of alpha-meso-phenylheme. J Biol Chem. 2008 Jul 11;283(28):19530-9. Epub 2008 May 16. PMID:18487208 doi:10.1074/jbc.M709685200
  10. 10.0 10.1 Raval CM, Lee PJ. Heme oxygenase-1 in lung disease. Curr Drug Targets. 2010 Dec;11(12):1532-40. PMID:20704548

This page originally authored by Barinder Chahal

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Michal Harel, Alexander Berchansky, Andrea Gorrell

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