6iya

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Structure of the DNA binding domain of antitoxin CopASO==
==Structure of the DNA binding domain of antitoxin CopASO==
-
<StructureSection load='6iya' size='340' side='right' caption='[[6iya]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
+
<StructureSection load='6iya' size='340' side='right'caption='[[6iya]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6iya]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6IYA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6IYA FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6iya]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Sheon Sheon]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6IYA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6IYA FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6iya FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6iya OCA], [http://pdbe.org/6iya PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6iya RCSB], [http://www.ebi.ac.uk/pdbsum/6iya PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6iya ProSAT]</span></td></tr>
+
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SO_1445 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=211586 SHEON])</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6iya FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6iya OCA], [http://pdbe.org/6iya PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6iya RCSB], [http://www.ebi.ac.uk/pdbsum/6iya PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6iya ProSAT]</span></td></tr>
</table>
</table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Toxin-antitoxin (TA) systems play critical roles in the environment adaptation of bacteria. Allosteric coupling between the N-terminal DNA-binding domain and the C-terminal toxin-binding domain of antitoxins contributes to conditional cooperativity in the functioning of type II TA. Herein, using circular dichroism (CD), nuclear magnetic resonance (NMR), X-ray crystallography, and size exclusion chromatography (SEC), the structure and DNA binding of CopASO, a newly identified type II antitoxin in Shewanella oneidensis, were investigated. Our data show that CopASO is a typical RHH antitoxin with an ordered N-terminal domain and a disordered C-terminal domain, and furthermore indicate that the C-terminal domain facilitates DNA binding of the N-terminal domain, which in turn induces the C-terminal domain to fold and associate.
 +
 +
Structure and allosteric coupling of type antitoxin CopASO.,Zhao R, Li Q, Zhang J, Li F, Yao J, Zhang J, Liu L, Wang X, Zhang X Biochem Biophys Res Commun. 2019 Jul 5;514(4):1122-1127. doi:, 10.1016/j.bbrc.2019.05.049. Epub 2019 May 14. PMID:31101334<ref>PMID:31101334</ref>
 +
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 6iya" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Sheon]]
[[Category: Li, F]]
[[Category: Li, F]]
[[Category: Liu, L]]
[[Category: Liu, L]]

Revision as of 06:16, 7 August 2019

Structure of the DNA binding domain of antitoxin CopASO

PDB ID 6iya

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools