6n8e

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<StructureSection load='6n8e' size='340' side='right'caption='[[6n8e]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
<StructureSection load='6n8e' size='340' side='right'caption='[[6n8e]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6n8e]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6N8E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6N8E FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6n8e]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Burkholderia_diffusa Burkholderia diffusa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6N8E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6N8E FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=KFG:dimethyl+hydrogen+phosphate'>KFG</scene>, <scene name='pdbligand=KFJ:4-(4-nitrophenyl)-L-threonine'>KFJ</scene>, <scene name='pdbligand=PNS:4-PHOSPHOPANTETHEINE'>PNS</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=KFG:dimethyl+hydrogen+phosphate'>KFG</scene>, <scene name='pdbligand=KFJ:4-(4-nitrophenyl)-L-threonine'>KFJ</scene>, <scene name='pdbligand=PNS:4-PHOSPHOPANTETHEINE'>PNS</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6n8e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6n8e OCA], [http://pdbe.org/6n8e PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6n8e RCSB], [http://www.ebi.ac.uk/pdbsum/6n8e PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6n8e ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6n8e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6n8e OCA], [http://pdbe.org/6n8e PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6n8e RCSB], [http://www.ebi.ac.uk/pdbsum/6n8e PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6n8e ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Nonribosomal peptide synthetases produce diverse natural products using a multidomain architecture where the growing peptide, attached to an integrated carrier domain, is delivered to neighboring catalytic domains for bond formation and modification. Investigation of these systems can lead to the discovery of new structures, unusual biosynthetic transformations, and to the engineering of catalysts for generating new products. The antimicrobial beta-lactone obafluorin is produced nonribosomally from dihydroxybenzoic acid and a beta-hydroxy amino acid that cyclizes into the beta-lactone during product release. Here we report the structure of the nonribosomal peptide synthetase ObiF1, highlighting the structure of the beta-lactone-producing thioesterase domain and an interaction between the C-terminal MbtH-like domain with an upstream adenylation domain. Biochemical assays examine catalytic promiscuity, provide mechanistic insight, and demonstrate utility for generating obafluorin analogs. These results advance our understanding of the structural cycle of nonribosomal peptide synthetases and provide insights into the production of beta-lactone natural products.
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The structural basis of N-acyl-alpha-amino-beta-lactone formation catalyzed by a nonribosomal peptide synthetase.,Kreitler DF, Gemmell EM, Schaffer JE, Wencewicz TA, Gulick AM Nat Commun. 2019 Jul 31;10(1):3432. doi: 10.1038/s41467-019-11383-7. PMID:31366889<ref>PMID:31366889</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 6n8e" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Burkholderia diffusa]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Gulick, A M]]
[[Category: Gulick, A M]]

Revision as of 17:25, 14 August 2019

Crystal structure of holo-ObiF1, a five domain nonribosomal peptide synthetase from Burkholderia diffusa

PDB ID 6n8e

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