6kl9

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m (Protected "6kl9" [edit=sysop:move=sysop])
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'''Unreleased structure'''
 
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The entry 6kl9 is ON HOLD
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==Structure of LbCas12a-crRNA complex bound to AcrVA4 (form A complex)==
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<StructureSection load='6kl9' size='340' side='right'caption='[[6kl9]], [[Resolution|resolution]] 3.25&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6kl9]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_baa-1259 Atcc baa-1259] and [http://en.wikipedia.org/wiki/Lachnospiraceae_bacterium Lachnospiraceae bacterium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6KL9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6KL9 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AAX07_09545 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=386891 ATCC BAA-1259])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6kl9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6kl9 OCA], [http://pdbe.org/6kl9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6kl9 RCSB], [http://www.ebi.ac.uk/pdbsum/6kl9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6kl9 ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Prokaryotes possess CRISPR-Cas systems to exclude parasitic predators, such as phages and mobile genetic elements (MGEs). These predators, in turn, encode anti-CRISPR (Acr) proteins to evade the CRISPR-Cas immunity. Recently, AcrVA4, an Acr protein inhibiting the CRISPR-Cas12a system, was shown to diminish Lachnospiraceae bacterium Cas12a (LbCas12a)-mediated genome editing in human cells, but the underlying mechanisms remain elusive. Here we report the cryo-EM structures of AcrVA4 bound to CRISPR RNA (crRNA)-loaded LbCas12a and found AcrVA4 could inhibit LbCas12a at several stages of the CRISPR-Cas working pathway, different from other characterized type I/II Acr inhibitors which target only 1 stage. First, it locks the conformation of the LbCas12a-crRNA complex to prevent target DNA-crRNA hybridization. Second, it interacts with the LbCas12a-crRNA-dsDNA complex to release the bound DNA before cleavage. Third, AcrVA4 binds the postcleavage LbCas12a complex to possibly block enzyme recycling. These findings highlight the multifunctionality of AcrVA4 and provide clues for developing regulatory genome-editing tools.
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Authors:
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Structural insight into multistage inhibition of CRISPR-Cas12a by AcrVA4.,Peng R, Li Z, Xu Y, He S, Peng Q, Wu LA, Wu Y, Qi J, Wang P, Shi Y, Gao GF Proc Natl Acad Sci U S A. 2019 Sep 17;116(38):18928-18936. doi:, 10.1073/pnas.1909400116. Epub 2019 Aug 29. PMID:31467167<ref>PMID:31467167</ref>
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Description:
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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<div class="pdbe-citations 6kl9" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Atcc baa-1259]]
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[[Category: Lachnospiraceae bacterium]]
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[[Category: Large Structures]]
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[[Category: Gao, G F]]
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[[Category: He, S]]
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[[Category: Li, Z]]
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[[Category: Peng, Q]]
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[[Category: Peng, R]]
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[[Category: Shi, Y]]
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[[Category: Xu, Y]]
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[[Category: Anti-crispr]]
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[[Category: Crispr-ca]]
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[[Category: Rna binding protein]]
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[[Category: Rna binding protein-rna complex]]

Revision as of 11:10, 2 October 2019

Structure of LbCas12a-crRNA complex bound to AcrVA4 (form A complex)

PDB ID 6kl9

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