6msl

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'''Unreleased structure'''
 
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The entry 6msl is ON HOLD until Paper Publication
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==Integrin AlphaVBeta3 ectodomain bound to EETI-II 2.5D==
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<StructureSection load='6msl' size='340' side='right'caption='[[6msl]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
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Authors: van Agthoven, J.F., Arnaout, M.A.
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6msl]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6MSL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6MSL FirstGlance]. <br>
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Description: Integrin AlphaVBeta3 ectodomain bound to EETI-II 2.5D
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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[[Category: Unreleased Structures]]
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3ije|3ije]], [[4mmx|4mmx]], [[4mmz|4mmz]], [[4mmy|4mmy]], [[4g1m|4g1m]], [[4g1e|4g1e]]</td></tr>
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[[Category: Van Agthoven, J.F]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6msl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6msl OCA], [http://pdbe.org/6msl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6msl RCSB], [http://www.ebi.ac.uk/pdbsum/6msl PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6msl ProSAT]</span></td></tr>
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[[Category: Arnaout, M.A]]
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</table>
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== Disease ==
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[[http://www.uniprot.org/uniprot/ITB3_HUMAN ITB3_HUMAN]] Defects in ITGB3 are a cause of Glanzmann thrombasthenia (GT) [MIM:[http://omim.org/entry/273800 273800]]; also known as thrombasthenia of Glanzmann and Naegeli. GT is the most common inherited disease of platelets. It is an autosomal recessive disorder characterized by mucocutaneous bleeding of mild-to-moderate severity and the inability of this integrin to recognize macromolecular or synthetic peptide ligands. GT has been classified clinically into types I and II. In type I, platelets show absence of the glycoprotein IIb/beta-3 complexes at their surface and lack fibrinogen and clot retraction capability. In type II, the platelets express the glycoprotein IIb/beta-3 complex at reduced levels (5-20% controls), have detectable amounts of fibrinogen, and have low or moderate clot retraction capability. The platelets of GT 'variants' have normal or near normal (60-100%) expression of dysfunctional receptors.<ref>PMID:2392682</ref> <ref>PMID:1371279</ref> <ref>PMID:1602006</ref> <ref>PMID:1438206</ref> <ref>PMID:8781422</ref> <ref>PMID:9376589</ref> <ref>PMID:9215749</ref> <ref>PMID:9790984</ref> <ref>PMID:9684783</ref> <ref>PMID:10233432</ref> <ref>PMID:11588040</ref> <ref>PMID:11897046</ref> <ref>PMID:12083483</ref> <ref>PMID:12353082</ref> <ref>PMID:15583747</ref> <ref>PMID:15634267</ref> <ref>PMID:15748237</ref>
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== Function ==
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[[http://www.uniprot.org/uniprot/ITAV_HUMAN ITAV_HUMAN]] The alpha-V integrins are receptors for vitronectin, cytotactin, fibronectin, fibrinogen, laminin, matrix metalloproteinase-2, osteopontin, osteomodulin, prothrombin, thrombospondin and vWF. They recognize the sequence R-G-D in a wide array of ligands. In case of HIV-1 infection, the interaction with extracellular viral Tat protein seems to enhance angiogenesis in Kaposi's sarcoma lesions. [[http://www.uniprot.org/uniprot/ITB3_HUMAN ITB3_HUMAN]] Integrin alpha-V/beta-3 is a receptor for cytotactin, fibronectin, laminin, matrix metalloproteinase-2, osteopontin, osteomodulin, prothrombin, thrombospondin, vitronectin and von Willebrand factor. Integrin alpha-IIb/beta-3 is a receptor for fibronectin, fibrinogen, plasminogen, prothrombin, thrombospondin and vitronectin. Integrins alpha-IIb/beta-3 and alpha-V/beta-3 recognize the sequence R-G-D in a wide array of ligands. Integrin alpha-IIb/beta-3 recognizes the sequence H-H-L-G-G-G-A-K-Q-A-G-D-V in fibrinogen gamma chain. Following activation integrin alpha-IIb/beta-3 brings about platelet/platelet interaction through binding of soluble fibrinogen. This step leads to rapid platelet aggregation which physically plugs ruptured endothelial surface. In case of HIV-1 infection, the interaction with extracellular viral Tat protein seems to enhance angiogenesis in Kaposi's sarcoma lesions.
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Agthoven, J F.van]]
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[[Category: Arnaout, M A]]
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[[Category: Beta propeller]]
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[[Category: Beta tail]]
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[[Category: Calf]]
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[[Category: Cell adhesion]]
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[[Category: Egf repeat]]
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[[Category: Fibronectin]]
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[[Category: Hybrid domain]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Rgd motif]]
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[[Category: Thigh]]
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[[Category: Vitronectin]]

Revision as of 06:52, 23 October 2019

Integrin AlphaVBeta3 ectodomain bound to EETI-II 2.5D

PDB ID 6msl

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