6nkq
From Proteopedia
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- | '''Unreleased structure''' | ||
- | The | + | ==The structure of bovine beta-lactoglobulin in novel crystals grown at pH 3.8== |
+ | <StructureSection load='6nkq' size='340' side='right'caption='[[6nkq]], [[Resolution|resolution]] 2.30Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[6nkq]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6NKQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6NKQ FirstGlance]. <br> | ||
+ | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6nkq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6nkq OCA], [http://pdbe.org/6nkq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6nkq RCSB], [http://www.ebi.ac.uk/pdbsum/6nkq PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6nkq ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [[http://www.uniprot.org/uniprot/LACB_BOVIN LACB_BOVIN]] Primary component of whey, it binds retinol and is probably involved in the transport of that molecule. | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Bovine beta-lactoglobulin was crystallized from 3 M NaCl buffered at pH 3.8 with sodium citrate as thick hexagonal prisms of greater than 1 mm in edge length. Analyses of the X-ray diffraction intensities using three different current algorithms were unanimous in specifying the space group to be P6322, with unit-cell dimensions a = b = 75.47, c = 140.79 A. No progress could be made, however, towards an acceptable solution by molecular replacement using this symmetry. In the end, it was found that the true space group was C2221, a subgroup of P6322, with a = 65.89, b = 114.12, c = 140.51 A, with the apparent 622 symmetry arising from an unusual threefold or tritohedral twinning. An assembly based on a model of the protein in another crystal form (PDB entry 1beb) containing three molecules in the asymmetric unit was refined to 2.3 A resolution with a final R factor of 0.23 and Rfree of 0.26. NCS restraints were maintained throughout. For the most part, the molecules found in this crystal form are virtually the same as in PDB entry 1beb, although there are numerous local variations, particularly in loop elements, rotamer conformation differences and some alterations, including additions, at the termini. | ||
- | + | The structure of bovine beta-lactoglobulin in crystals grown at pH 3.8 exhibiting novel threefold twinning.,Yeates TO, McPherson A Acta Crystallogr F Struct Biol Commun. 2019 Oct 1;75(Pt 10):640-645. doi:, 10.1107/S2053230X1901224X. Epub 2019 Sep 20. PMID:31584012<ref>PMID:31584012</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
- | [[Category: | + | <div class="pdbe-citations 6nkq" style="background-color:#fffaf0;"></div> |
+ | |||
+ | ==See Also== | ||
+ | *[[Beta-lactoglobulin 3D structures|Beta-lactoglobulin 3D structures]] | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Bos taurus]] | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: McPherson, A]] | ||
+ | [[Category: Milk]] | ||
+ | [[Category: Molecular replacement]] | ||
+ | [[Category: Space group]] | ||
+ | [[Category: Tanford transition]] | ||
+ | [[Category: Twinning]] | ||
+ | [[Category: Unknown function]] | ||
+ | [[Category: Whey protein]] |
Revision as of 08:27, 6 November 2019
The structure of bovine beta-lactoglobulin in novel crystals grown at pH 3.8
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