Nucleoporin
From Proteopedia
(Difference between revisions)
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</StructureSection> | </StructureSection> | ||
| - | == 3D Structures of Nucleoporin == | ||
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| - | Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} | ||
| - | {{#tree:id=OrganizedByTopic|openlevels=0| | ||
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| - | *NUP2 | ||
| - | **[[3n7c]] – NUP2 RANBD – ''Ashbya gossypii''<br /> | ||
| - | **[[2c1t]] – yNUP2 NTD +importrin alpha subunit - yeast<br /> | ||
| - | *NUP35 | ||
| - | **[[1wwh]] – mNUP35 MPPN domain - mouse<br /> | ||
| - | *NUP37 | ||
| - | **[[4fhl]] – fyNUP37 – fission yeast<br /> | ||
| - | **[[4fhm]], [[4fhn]], [[4gq2]] - fyNUP37 + NUP120<br /> | ||
| - | *NUP43 | ||
| - | **[[4i79]] – hNUP43 + polypeptide - human<br /> | ||
| - | *NUP50 | ||
| - | **[[2ec1]] – hNUP50 RANBD <br /> | ||
| - | **[[3tj3]] - hNUP50 NTD+importin<br /> | ||
| - | **[[2c1m]] – mNUP50 NTD +importin <br /> | ||
| - | *NUP53 | ||
| - | **[[3p3d]] - NUP53 RRM domain - ''Pischia guillermondii''<br /> | ||
| - | **[[4lir]] – hNUP53 residues 151-266<br /> | ||
| - | **[[5uaz]] – yNUP53 <br /> | ||
| - | **[[5hb8]], [[5hb7]] – CtNUP53 - ''Chaetomium thermophilum''<br /> | ||
| - | **[[5hb3]] – CtNUP53 + NUP NIC96 <br /> | ||
| - | *NUP54 | ||
| - | **[[4jo7]], [[4jo9]] – hNUP54 + hNUP58/45 <br /> | ||
| - | **[[3t97]] – rNUP54 + NUP62 - rat<br /> | ||
| - | **[[4j3h]] – rNUP54 (mutant)<br /> | ||
| - | **[[3t98]] – rNUP54 + rNUP58/45 <br /> | ||
| - | **[[5c3l]] – fNUP54 coiled coil + NUP58 coiled coil + NUP62 coiled coil + nanobody - frog<br /> | ||
| - | **[[5c2u]] – fNUP54 ferredoxin-like domain + nanobody <br /> | ||
| - | *NUP57 | ||
| - | **[[5cwt]] – CtNUP57 residues 265-317<br /> | ||
| - | **[[5cws]] – CtNUP57 residues 74-319 + NUP49 + NIC96 + antibody<br /> | ||
| - | *NUP58 | ||
| - | **[[4jq5]] – hNUP58/45 <br /> | ||
| - | **[[2osz]] – rNUP58/45 <br /> | ||
| - | *NUP62 | ||
| - | **[[5h1x]] – rNUP62 coiled-coil domain<br /> | ||
| - | *NUP82 | ||
| - | **[[3pbp]] – yNUP82 NTD + NUP116 CTD + NUP159 CTD<br /> | ||
| - | **[[3tkn]] - yNUP82 NTD + NUP98 + NUP159 CTD<br /> | ||
| - | **[[5cww]] – CtNUP82 + CtNUP145 CTD peptide + Ct159 CTD peptide<br /> | ||
| - | *NUP84 | ||
| - | **[[3jro]], [[3iko]] – yNUP84+NUP145+protein Sec13<br /> | ||
| - | **[[4xmm]] - yNUP84+NUP85+NUP120+NUP145+protein Seh1 + antibody<br /> | ||
| - | **[[4xmn]] - yNUP84+NUP85+NUP120+NUP145 + antibody<br /> | ||
| - | *NUP85 | ||
| - | **[[3f3f]], [[3f3g]], [[3f3p]], [[3ewe]] – yNUP85+Seh1<br /> | ||
| - | *NUP98 | ||
| - | **[[3mmy]] – hNUP98 fragment+mRNA export factor <br /> | ||
| - | **[[2q5x]], [[2q5y]] – hNUP98 CTD<br /> | ||
| - | **[[1ko6]] – hNUP98 CTD<br /> | ||
| - | *NUP100 | ||
| - | **[[3nf5]] – NUP100 CTD – ''Candida glabrata''<br /> | ||
| - | *NUP107 | ||
| - | **[[3i4r]], [[3cqc]], [[3cqg]] – hNUP107+NUP133<br /> | ||
| - | *NUP116 | ||
| - | **[[2aiv]] – yNUP116 CTD - NMR<br /> | ||
| - | *NUP120 | ||
| - | **[[3f7f]], [[3h7n]], [[3hxr]] – yNUP120<br /> | ||
| - | *NUP133 | ||
| - | **[[1xks]], [[4q9t]] – hNUP133 NTD<br /> | ||
| - | **[[3kfo]] – yNUP133 CTD <br /> | ||
| - | *NUP145 | ||
| - | **[[3bg0]], [[3bg1]] – hNUP145+Sec13-related protein<br /> | ||
| - | **[[3kep]], [[3kes]] – yNUP145 autoproteolytic domain<br /> | ||
| - | **[[3jrp]] - yNUP145+protein Sec13<br /> | ||
| - | **[[5hb5]] – CtNUP145 <br /> | ||
| - | **[[5hb6]] – CtNUP145 (mutant)<br /> | ||
| - | *NUP152 | ||
| - | **[[5tvz]] – yNUP152 Ig-like repeats - NMR<br /> | ||
| - | *NUP153 | ||
| - | **[[3gj3]], [[3gj4]], [[3gj5]], [[3gj6]], [[3gj7]], [[3gj8]], [[3ch5]] – hNUP153+RAN<br /> | ||
| - | **[[2ebq]], [[2ebr]], [[2ebv]], [[2gqe]] - hNUP153 RANBD – NMR<br /> | ||
| - | **[[2k0c]] – rNUP153 RANBD – NMR<br /> | ||
| - | *NUP157 | ||
| - | **[[4mhc]] – hNUP157 NTD<br /> | ||
| - | *NUP159 | ||
| - | **[[1xip]] – yNUP159 NTD<br /> | ||
| - | **[[3rrm]] – yNUP159 residues 2-387 + NUP Gle1 + IP6 + ADP<br /> | ||
| - | *NUP170 | ||
| - | **[[3i5p]], [[3i5q]] – yNUP170<br /> | ||
| - | **[[5hb1]] – CtNUP170 <br /> | ||
| - | **[[5haz]] – CtNUP170 CTD<br /> | ||
| - | **[[5hay]] – CtNUP170 CTD (mutant)<br /> | ||
| - | **[[5hb0]] – CtNUP170 (mutant) + CtNUP145 peptide<br /> | ||
| - | **[[5hax]] – CtNUP170 NTD + CtNUP53 peptide<br /> | ||
| - | *NUP188 | ||
| - | **[[5cwu]] – CtNUP192 tail domain<br /> | ||
| - | *NUP192 | ||
| - | **[[4ifq]] – yNUP192<br /> | ||
| - | **[[5hb4]] – CtNUP192 <br /> | ||
| - | **[[5cwv]] – CtNUP192 tail domain<br /> | ||
| - | *NUP214 | ||
| - | **[[3fmo]], [[3fmp]], [[3fhc]] – hNUP214+dead-box helicase<br /> | ||
| - | **[[2oit]] – hNUP214 NTD<br /> | ||
| - | *NUP358 | ||
| - | **[[1z5s]] – hNUP358 IR1 domain+ubiquitin-conjugating enzyme+SMT3C+RAN CTD<br /> | ||
| - | **[[1xke]] - hNUP358 RANBD - NMR<br /> | ||
| - | *NUP1P | ||
| - | **[[5owu]] – NUP1P+Kap95 complex<br /> | ||
| - | *NUP2P | ||
| - | **[[1un0]] – yNUP2P NTD+importrin α subunit<br /> | ||
| - | *NUP-NSP1 | ||
| - | **[[1o6o]] – yNUP-NSP1 residues 497-608+importrin β subunit<br /> | ||
| - | *NUP-CDC31 | ||
| - | **[[2doq]], [[2gv5]] – yNUP-CDC31+SFI1P<br /> | ||
| - | **[[3fwb]], [[3fwc]] - yNUP-CDC31+SAC3<br /> | ||
| - | |||
| - | *NUP Gle1 | ||
| - | **[[3peu]], [[3pev]], [[3rrn]]– yNUP-Gle1 + ATP-dependent RNA helicase Dbp5 (mutant) +IP6<br /> | ||
| - | **[[6b4e]] – yNUP-Gle1 + NUP42 <br /> | ||
| - | **[[6b4g]], [[6b4h]] – CtNUP-Gle1 + NUP Amo1 <br /> | ||
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| - | *Nuclear pore complex | ||
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| - | **[[5ijo]], [[5ijn]] – hNUP93 + NUP155 + NUP205 + NUP54 + NUP58 + NUP62 + NUP188 – Cryo EM<br /> | ||
| - | **[[5a9q]] – hNUP96 + NUP133 + NUP160 + NUP43 + NUP37 + NUP85 + NUP155 + NUP107 + Sec13 + Seh1 – Cryo EM<br /> | ||
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| - | **[[2rfo]], [[2qx5]] – yNic96<br /> | ||
| - | **[[5hb2]] – CtNic96 <br /> | ||
| - | **[[1gyb]] – NUP+yNTF2<br /> | ||
| - | }} | ||
== References == | == References == | ||
<references/> | <references/> | ||
[[Category:Topic Page]] | [[Category:Topic Page]] | ||
Current revision
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References
- ↑ Doye V, Hurt E. From nucleoporins to nuclear pore complexes. Curr Opin Cell Biol. 1997 Jun;9(3):401-11. PMID:9159086
- ↑ Belanger KD, Kenna MA, Wei S, Davis LI. Genetic and physical interactions between Srp1p and nuclear pore complex proteins Nup1p and Nup2p. J Cell Biol. 1994 Aug;126(3):619-30. PMID:8045927
- ↑ Solsbacher J, Maurer P, Vogel F, Schlenstedt G. Nup2p, a yeast nucleoporin, functions in bidirectional transport of importin alpha. Mol Cell Biol. 2000 Nov;20(22):8468-79. PMID:11046143
- ↑ Cronshaw JM, Matunis MJ. The nuclear pore complex: disease associations and functional correlations. Trends Endocrinol Metab. 2004 Jan-Feb;15(1):34-9. PMID:14693424
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