Sandbox Reserved 1595

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==Nitrate Transporter==
==Nitrate Transporter==
<StructureSection load='1stp' size='340' side='right' caption='Caption for this structure' scene=''>
<StructureSection load='1stp' size='340' side='right' caption='Caption for this structure' scene=''>
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This is a default text for your page ''''''. Click above on '''edit this page''' to modify. Be careful with the &lt; and &gt; signs.
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Nitrate Transporter is a protein compound found in bacteria, specifically Escherichia coli<ref>PMID:11967075</ref>.This protein compound is a complex made up of NarK and NarU. NarU has appeared to be a bigger factor in the function than NarK but both are functionally important.
Nitrate Transporter is a protein compound found in bacteria, specifically Escherichia coli<ref>PMID:11967075</ref>.This protein compound is a complex made up of NarK and NarU. NarU has appeared to be a bigger factor in the function than NarK but both are functionally important.
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== Structural highlights ==
== Structural highlights ==
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The structure of Nitrate transporter does not have many significant sections. NarK is not shown in the picture but the NarU does have amino acids to feature. Specifically Arg87, Arg303, As173, and Tyr261 are four amino acids that have solid electron density and seems to have functional importance. <scene name='82/824624/Substrate_binding_sites_87-303/2'>Text To Be Displayed</scene>
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The structure of Nitrate transporter does not have many significant sections. NarK is not shown in the picture but the NarU does have amino acids to feature. Specifically Arg87, Arg303, As173, and Tyr261 are four amino acids that have solid electron density and seems to have functional importance.<scene name='82/824640/Naru_87-303_highlight/1'>These amino acids</scene> are the four that are the biding site for some of the nitrate that is being transported.
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This is a sample scene created with SAT to <scene name="/12/3456/Sample/1">color</scene> by Group, and another to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes.
 
</StructureSection>
</StructureSection>
== References ==
== References ==
<references/>
<references/>

Revision as of 17:03, 30 November 2019

This Sandbox is Reserved from September 14, 2021, through May 31, 2022, for use in the class Introduction to Biochemistry taught by User:John Means at the University of Rio Grande, Rio Grande, OH, USA. This reservation includes 5 reserved sandboxes (Sandbox Reserved 1590 through Sandbox Reserved 1594).
To get started:
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More help: Help:Editing. For an example of a student Proteopedia page, please see Photosystem II, Tetanospasmin, or Guanine riboswitch.

Nitrate Transporter

Caption for this structure

Drag the structure with the mouse to rotate

References

  1. Clegg S, Yu F, Griffiths L, Cole JA. The roles of the polytopic membrane proteins NarK, NarU and NirC in Escherichia coli K-12: two nitrate and three nitrite transporters. Mol Microbiol. 2002 Apr;44(1):143-55. doi: 10.1046/j.1365-2958.2002.02858.x. PMID:11967075 doi:http://dx.doi.org/10.1046/j.1365-2958.2002.02858.x
  2. Yan H, Huang W, Yan C, Gong X, Jiang S, Zhao Y, Wang J, Shi Y. Structure and mechanism of a nitrate transporter. Cell Rep. 2013 Mar 28;3(3):716-23. doi: 10.1016/j.celrep.2013.03.007. Epub 2013, Mar 21. PMID:23523348 doi:http://dx.doi.org/10.1016/j.celrep.2013.03.007
  3. Clegg S, Yu F, Griffiths L, Cole JA. The roles of the polytopic membrane proteins NarK, NarU and NirC in Escherichia coli K-12: two nitrate and three nitrite transporters. Mol Microbiol. 2002 Apr;44(1):143-55. doi: 10.1046/j.1365-2958.2002.02858.x. PMID:11967075 doi:http://dx.doi.org/10.1046/j.1365-2958.2002.02858.x
  4. Yan H, Huang W, Yan C, Gong X, Jiang S, Zhao Y, Wang J, Shi Y. Structure and mechanism of a nitrate transporter. Cell Rep. 2013 Mar 28;3(3):716-23. doi: 10.1016/j.celrep.2013.03.007. Epub 2013, Mar 21. PMID:23523348 doi:http://dx.doi.org/10.1016/j.celrep.2013.03.007
  5. Brons HJ, Zehnder AJ. Aerobic nitrate and nitrite reduction in continuous cultures of Escherichia coli E4. Arch Microbiol. 1990;153(6):531-6. doi: 10.1007/bf00245261. PMID:2196029 doi:http://dx.doi.org/10.1007/bf00245261
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