Sandbox Reserved 1566

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== Function(s) and Biological Relevance == <scene name='82/823090/Secondary_structure/8'>β-prism and β-propeller domains highlight key secondary structures in 6MLT</scene>
== Function(s) and Biological Relevance == <scene name='82/823090/Secondary_structure/8'>β-prism and β-propeller domains highlight key secondary structures in 6MLT</scene>
<scene name='82/823090/Space_fill/1'>Hydrophilic Amino Acids Important in Carbohydrate Binding</scene>
<scene name='82/823090/Space_fill/1'>Hydrophilic Amino Acids Important in Carbohydrate Binding</scene>
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One of the major functions of Bap1 is it's sugar binding properties. This image shows the binding pocket on the beta-prism, which is where carbohydrates bind. The molecule is shown in spacefill and is colored based on hydrophobicity. Hydrophilic residues are shown in blue, with hydrophobic residues in red, and non charged residues in white. Lys, which makes up a large part of the binding pocket is represented in pink. The positively charged side chain on Lys makes it great for negatively charged sugars to bind to.
== Broader Implications ==
== Broader Implications ==
<scene name=
<scene name=

Revision as of 23:27, 30 November 2019

This Sandbox is Reserved from Aug 26 through Dec 12, 2019 for use in the course CHEM 351 Biochemistry taught by Bonnie_Hall at the Grand View University, Des Moines, USA. This reservation includes Sandbox Reserved 1556 through Sandbox Reserved 1575.
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Stucture of 6MLT

Caption for this structure

Drag the structure with the mouse to rotate

References

  1. ↑ Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
  2. ↑ Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644
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