6jcl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 6jcl is ON HOLD until Paper Publication
+
==Crystal structure of cofactor-bound Rv0187 from MTB==
 +
<StructureSection load='6jcl' size='340' side='right'caption='[[6jcl]], [[Resolution|resolution]] 1.64&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[6jcl]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6JCL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6JCL FirstGlance]. <br>
 +
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene>, <scene name='pdbligand=SR:STRONTIUM+ION'>SR</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6jcl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6jcl OCA], [http://pdbe.org/6jcl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6jcl RCSB], [http://www.ebi.ac.uk/pdbsum/6jcl PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6jcl ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[[http://www.uniprot.org/uniprot/CAMT_MYCTU CAMT_MYCTU]] Catechol O-methyltransferase that can use various catechol-like compounds such as gallic acid (GA), 3,4-dihydroxy-5-methoxy-benzoic acid (5OMeBA), protocatechuic acid (PCA), 3,4-dihydroxy-benzaldehyde (DHA), dopamine, caffeic acid (CA), luteolin, quercetin, and 5-hydroxyuridine.<ref>PMID:31147608</ref>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Catechol O-methyltransferase (COMT) is widely distributed in nature and installs a methyl group onto one of the vicinal hydroxyl groups of a catechol derivative. Enzymes belonging to this family require two cofactors for methyl transfer: S-adenosyl-l-methionine as a methyl donor and a divalent metal cation for regiospecific binding and activation of a substrate. We have determined two high-resolution crystal structures of Rv0187, one of three COMT paralogs from Mycobacterium tuberculosis, in the presence and absence of cofactors. The cofactor-bound structure clearly locates strontium ions and S-adenosyl-l-homocysteine in the active site, and together with the complementary structure of the ligand-free form, it suggests conformational dynamics induced by the binding of cofactors. Examination of in vitro activities revealed promiscuous substrate specificity and relaxed regioselectivity against various catechol-like compounds. Unexpectedly, mutation of the proposed catalytic lysine residue did not abolish activity but altered the overall landscape of regiospecific methylation.
-
Authors: Kim, J., Lee, S.
+
Structural and biochemical characterization of Rv0187, an O-methyltransferase from Mycobacterium tuberculosis.,Lee S, Kang J, Kim J Sci Rep. 2019 May 30;9(1):8059. doi: 10.1038/s41598-019-44592-7. PMID:31147608<ref>PMID:31147608</ref>
-
Description: Crystal structure of cofactor-bound Rv0187 from MTB
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
-
[[Category: Lee, S]]
+
<div class="pdbe-citations 6jcl" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Kim, J]]
[[Category: Kim, J]]
 +
[[Category: Lee, S]]
 +
[[Category: Metal binding protein]]
 +
[[Category: Methyltransferase]]

Revision as of 15:03, 11 December 2019

Crystal structure of cofactor-bound Rv0187 from MTB

PDB ID 6jcl

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools