This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6ndo

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "6ndo" [edit=sysop:move=sysop])
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 6ndo is ON HOLD until Dec 14 2020
+
==Crystal structure of the dark-adapted full-length bacteriophytochrome XccBphP mutant L193N from Xanthomonas campestris==
-
 
+
<StructureSection load='6ndo' size='340' side='right'caption='[[6ndo]], [[Resolution|resolution]] 3.58&Aring;' scene=''>
-
Authors:
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[6ndo]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6NDO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6NDO FirstGlance]. <br>
-
Description:
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene></td></tr>
-
[[Category: Unreleased Structures]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6ndo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ndo OCA], [http://pdbe.org/6ndo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6ndo RCSB], [http://www.ebi.ac.uk/pdbsum/6ndo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6ndo ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[[http://www.uniprot.org/uniprot/BPHY_XANC8 BPHY_XANC8]] Photoreceptor which exists in two forms that are reversibly interconvertible by light: far-red light (733 nm) converts protein to the red-absorbing (Pr) form, while red light (630 nm) partly converts the protein to the far-red-absorbing (Pfr) form (PubMed:27107635). Regulates virulence of X.campestris pv. campestris on its host plants, perhaps by fine-tuning expression to ambient light levels and/or spatial cues (PubMed:27621284). The Pr form may sense light and partially inhibit virulence; in the dark (Pfr form) biofilm and xanathan production rise and bacteria are more virulent (PubMed:27621284). Strains overexpressing this protein have significantly decreased amounts of extracellular beta-1,4-endoglucanase, produce less xanthin and have decreased transcription of genes involved in virulence such as endoglucanases, type 2 secretion systems, xanthan production and flagellar-dependent motility (PubMed:27621284).<ref>PMID:27107635</ref> <ref>PMID:27621284</ref> <ref>PMID:27621284</ref>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Bonomi, H R]]
 +
[[Category: Chavas, L]]
 +
[[Category: Conforte, V]]
 +
[[Category: Goldbaum, F A]]
 +
[[Category: Klinke, S]]
 +
[[Category: Malamud, F]]
 +
[[Category: Otero, L H]]
 +
[[Category: Rinaldi, J]]
 +
[[Category: Sirigu, S]]
 +
[[Category: Bacterial protein]]
 +
[[Category: Photoreceptor]]
 +
[[Category: Photosensor]]
 +
[[Category: Phytochrome]]
 +
[[Category: Phytopathogen]]
 +
[[Category: Red/far-red light]]
 +
[[Category: Signal transduction]]
 +
[[Category: Signaling protein]]

Revision as of 07:43, 18 December 2019

Crystal structure of the dark-adapted full-length bacteriophytochrome XccBphP mutant L193N from Xanthomonas campestris

PDB ID 6ndo

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools