4kqz
From Proteopedia
(Difference between revisions)
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==structure of the receptor binding domain (RBD) of MERS-CoV spike== | ==structure of the receptor binding domain (RBD) of MERS-CoV spike== | ||
- | <StructureSection load='4kqz' size='340' side='right' caption='[[4kqz]], [[Resolution|resolution]] 2.51Å' scene=''> | + | <StructureSection load='4kqz' size='340' side='right'caption='[[4kqz]], [[Resolution|resolution]] 2.51Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[4kqz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human_betacoronavirus_2c_emc/2012 Human betacoronavirus 2c emc/2012]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KQZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4KQZ FirstGlance]. <br> | <table><tr><td colspan='2'>[[4kqz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human_betacoronavirus_2c_emc/2012 Human betacoronavirus 2c emc/2012]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KQZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4KQZ FirstGlance]. <br> | ||
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4kqz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kqz OCA], [http://pdbe.org/4kqz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4kqz RCSB], [http://www.ebi.ac.uk/pdbsum/4kqz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4kqz ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4kqz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kqz OCA], [http://pdbe.org/4kqz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4kqz RCSB], [http://www.ebi.ac.uk/pdbsum/4kqz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4kqz ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | The newly emergent Middle East respiratory syndrome coronavirus (MERS-CoV) can cause severe pulmonary disease in humans, representing the second example of a highly pathogenic coronavirus, the first being SARS-CoV. CD26 (also known as dipeptidyl peptidase 4, DPP4) was recently identified as the cellular receptor for MERS-CoV. The engagement of the MERS-CoV spike protein with CD26 mediates viral attachment to host cells and virus-cell fusion, thereby initiating infection. Here we delineate the molecular basis of this specific interaction by presenting the first crystal structures of both the free receptor binding domain (RBD) of the MERS-CoV spike protein and its complex with CD26. Furthermore, binding between the RBD and CD26 is measured using real-time surface plasmon resonance with a dissociation constant of 16.7 nM. The viral RBD is composed of a core subdomain homologous to that of the SARS-CoV spike protein, and a unique strand-dominated external receptor binding motif that recognizes blades IV and V of the CD26 beta-propeller. The atomic details at the interface between the two binding entities reveal a surprising protein-protein contact mediated mainly by hydrophilic residues. Sequence alignment indicates, among betacoronaviruses, a possible structural conservation for the region homologous to the MERS-CoV RBD core, but a high variation in the external receptor binding motif region for virus-specific pathogenesis such as receptor recognition. | ||
+ | |||
+ | Molecular basis of binding between novel human coronavirus MERS-CoV and its receptor CD26.,Lu G, Hu Y, Wang Q, Qi J, Gao F, Li Y, Zhang Y, Zhang W, Yuan Y, Bao J, Zhang B, Shi Y, Yan J, Gao GF Nature. 2013 Aug 8;500(7461):227-31. doi: 10.1038/nature12328. Epub 2013 Jul 7. PMID:23831647<ref>PMID:23831647</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 4kqz" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Human betacoronavirus 2c emc/2012]] | [[Category: Human betacoronavirus 2c emc/2012]] | ||
+ | [[Category: Large Structures]] | ||
[[Category: Bao, J]] | [[Category: Bao, J]] | ||
[[Category: Gao, F]] | [[Category: Gao, F]] |
Revision as of 08:19, 18 December 2019
structure of the receptor binding domain (RBD) of MERS-CoV spike
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Categories: Human betacoronavirus 2c emc/2012 | Large Structures | Bao, J | Gao, F | Gao, G F | Hu, Y | Li, Y | Lu, G | Qi, J | Shi, Y | Wang, Q | Yan, J | Yuan, Y | Zhang, B | Zhang, W | Zhang, Y | Cd26 | Core subdomain | Receptor binding | Strand-dominated receptor binding motif | Viral protein | Viral surface