3whs
From Proteopedia
(Difference between revisions)
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==Crystal structure of Bacillus subtilis gamma-glutamyltranspeptidase in complex with acivicin== | ==Crystal structure of Bacillus subtilis gamma-glutamyltranspeptidase in complex with acivicin== | ||
| - | <StructureSection load='3whs' size='340' side='right' caption='[[3whs]], [[Resolution|resolution]] 1.80Å' scene=''> | + | <StructureSection load='3whs' size='340' side='right'caption='[[3whs]], [[Resolution|resolution]] 1.80Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3whs]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacsu Bacsu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WHS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3WHS FirstGlance]. <br> | <table><tr><td colspan='2'>[[3whs]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacsu Bacsu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WHS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3WHS FirstGlance]. <br> | ||
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3whs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3whs OCA], [http://pdbe.org/3whs PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3whs RCSB], [http://www.ebi.ac.uk/pdbsum/3whs PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3whs ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3whs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3whs OCA], [http://pdbe.org/3whs PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3whs RCSB], [http://www.ebi.ac.uk/pdbsum/3whs PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3whs ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | gamma-Glutamyltranspeptidase (GGT) is an enzyme that plays a central role in glutathione metabolism, and acivicin is a classical inhibitor of GGT. Here, the structure of acivicin bound to Bacillus subtilis GGT determined by X-ray crystallography to 1.8 A resolution is presented, in which it binds to the active site in a similar manner to that in Helicobacter pylori GGT, but in a different binding mode to that in Escherichia coli GGT. In B. subtilis GGT, acivicin is bound covalently through its C3 atom with sp2 hybridization to Thr403 Ogamma, the catalytic nucleophile of the enzyme. The results show that acivicin-binding sites are common, but the binding manners and orientations of its five-membered dihydroisoxazole ring are diverse in the binding pockets of GGTs. | ||
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| + | Structure of Bacillus subtilis gamma-glutamyltranspeptidase in complex with acivicin: diversity of the binding mode of a classical and electrophilic active-site-directed glutamate analogue.,Ida T, Suzuki H, Fukuyama K, Hiratake J, Wada K Acta Crystallogr D Biol Crystallogr. 2014 Feb;70(Pt 2):607-14. doi:, 10.1107/S1399004713031222. Epub 2014 Jan 31. PMID:24531494<ref>PMID:24531494</ref> | ||
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| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 3whs" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Bacsu]] | [[Category: Bacsu]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Fukuyama, K]] | [[Category: Fukuyama, K]] | ||
[[Category: Wada, K]] | [[Category: Wada, K]] | ||
Revision as of 09:57, 25 December 2019
Crystal structure of Bacillus subtilis gamma-glutamyltranspeptidase in complex with acivicin
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