5dqq
From Proteopedia
(Difference between revisions)
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==Structure, inhibition and regulation of two-pore channel TPC1 from Arabidopsis thaliana== | ==Structure, inhibition and regulation of two-pore channel TPC1 from Arabidopsis thaliana== | ||
| - | <StructureSection load='5dqq' size='340' side='right' caption='[[5dqq]], [[Resolution|resolution]] 2.87Å' scene=''> | + | <StructureSection load='5dqq' size='340' side='right'caption='[[5dqq]], [[Resolution|resolution]] 2.87Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5dqq]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DQQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5DQQ FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5dqq]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arath Arath]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DQQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5DQQ FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=66R:TRANS-NED+19'>66R</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PLM:PALMITIC+ACID'>PLM</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=66R:TRANS-NED+19'>66R</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PLM:PALMITIC+ACID'>PLM</scene></td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TPC1, CCH1, FOU2, At4g03560, F9H3.19, T5L23.5 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5dqq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dqq OCA], [http://pdbe.org/5dqq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5dqq RCSB], [http://www.ebi.ac.uk/pdbsum/5dqq PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5dqq ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5dqq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dqq OCA], [http://pdbe.org/5dqq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5dqq RCSB], [http://www.ebi.ac.uk/pdbsum/5dqq PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5dqq ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
[[http://www.uniprot.org/uniprot/TPC1_ARATH TPC1_ARATH]] Functions as a voltage-gated inward-rectifying Ca(2+) channel (VDCC) across the vacuole membrane. Is one of the essential components of the slow vacuolar (SV) channel. Acts as the major ROS-responsive Ca(2+) channel and is the possible target of Al-dependent inhibition. Involved in the regulation of germination and stomatal movement.<ref>PMID:15464979</ref> <ref>PMID:15772667</ref> | [[http://www.uniprot.org/uniprot/TPC1_ARATH TPC1_ARATH]] Functions as a voltage-gated inward-rectifying Ca(2+) channel (VDCC) across the vacuole membrane. Is one of the essential components of the slow vacuolar (SV) channel. Acts as the major ROS-responsive Ca(2+) channel and is the possible target of Al-dependent inhibition. Involved in the regulation of germination and stomatal movement.<ref>PMID:15464979</ref> <ref>PMID:15772667</ref> | ||
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| + | ==See Also== | ||
| + | *[[Ion channels 3D structures|Ion channels 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Arath]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Kintzer, A F]] | [[Category: Kintzer, A F]] | ||
[[Category: Stroud, R M]] | [[Category: Stroud, R M]] | ||
Revision as of 11:27, 25 December 2019
Structure, inhibition and regulation of two-pore channel TPC1 from Arabidopsis thaliana
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Categories: Arath | Large Structures | Kintzer, A F | Stroud, R M | Asymmetric ion channel | C-terminal domain | Calcium channel | Calcium sensor | Ef-hand domain | Ion channel | Membrane protein | N-terminal domain | Phosphorylation dependent ion channel | Pore gate | Selectivity filter | Sodium channel | Tandem pore-forming domain | Transport protein-inhibitor complex | Voltage sensor
