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5knl
From Proteopedia
(Difference between revisions)
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==Crystal structure of S. pombe ubiquitin E1 (Uba1) in complex with Ubc15 and ubiquitin== | ==Crystal structure of S. pombe ubiquitin E1 (Uba1) in complex with Ubc15 and ubiquitin== | ||
| - | <StructureSection load='5knl' size='340' side='right' caption='[[5knl]], [[Resolution|resolution]] 2.50Å' scene=''> | + | <StructureSection load='5knl' size='340' side='right'caption='[[5knl]], [[Resolution|resolution]] 2.50Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5knl]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KNL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5KNL FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5knl]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_34888 Atcc 34888] and [http://en.wikipedia.org/wiki/Fission_yeast Fission yeast]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5KNL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5KNL FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ptr3, SPBC1604.21c, SPBC211.09 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=284812 Fission yeast]), PAN0_008c3613 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=84753 ATCC 34888]), ubc15, SPBC1105.09 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=284812 Fission yeast])</td></tr> | ||
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/E1_ubiquitin-activating_enzyme E1 ubiquitin-activating enzyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.2.1.45 6.2.1.45] </span></td></tr> | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/E1_ubiquitin-activating_enzyme E1 ubiquitin-activating enzyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.2.1.45 6.2.1.45] </span></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5knl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5knl OCA], [http://pdbe.org/5knl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5knl RCSB], [http://www.ebi.ac.uk/pdbsum/5knl PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5knl ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5knl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5knl OCA], [http://pdbe.org/5knl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5knl RCSB], [http://www.ebi.ac.uk/pdbsum/5knl PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5knl ProSAT]</span></td></tr> | ||
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</div> | </div> | ||
<div class="pdbe-citations 5knl" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 5knl" style="background-color:#fffaf0;"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Ubiquitin|Ubiquitin]] | ||
| + | *[[Ubiquitin activating enzyme|Ubiquitin activating enzyme]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Atcc 34888]] | ||
[[Category: E1 ubiquitin-activating enzyme]] | [[Category: E1 ubiquitin-activating enzyme]] | ||
| + | [[Category: Fission yeast]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Lv, Z]] | [[Category: Lv, Z]] | ||
[[Category: Olsen, S K]] | [[Category: Olsen, S K]] | ||
Revision as of 12:19, 25 December 2019
Crystal structure of S. pombe ubiquitin E1 (Uba1) in complex with Ubc15 and ubiquitin
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Categories: Atcc 34888 | E1 ubiquitin-activating enzyme | Fission yeast | Large Structures | Lv, Z | Olsen, S K | Williams, K | Yuan, L | Adenylation | Atp-binding | Conformational change | E1 | E2 | Ligase | Thioester | Uba1 | Ubc15 | Ubiquitin | Ubiquitin e2 binding | Ubiquitination
