5yo8
From Proteopedia
(Difference between revisions)
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==Crystal structure of beta-C25/C30/C35-prene synthase== | ==Crystal structure of beta-C25/C30/C35-prene synthase== | ||
- | <StructureSection load='5yo8' size='340' side='right' caption='[[5yo8]], [[Resolution|resolution]] 1.64Å' scene=''> | + | <StructureSection load='5yo8' size='340' side='right'caption='[[5yo8]], [[Resolution|resolution]] 1.64Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[5yo8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_alcalophilus_atcc_27647 Bacillus alcalophilus atcc 27647]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YO8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5YO8 FirstGlance]. <br> | <table><tr><td colspan='2'>[[5yo8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_alcalophilus_atcc_27647 Bacillus alcalophilus atcc 27647]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YO8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5YO8 FirstGlance]. <br> | ||
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5yo8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5yo8 OCA], [http://pdbe.org/5yo8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5yo8 RCSB], [http://www.ebi.ac.uk/pdbsum/5yo8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5yo8 ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5yo8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5yo8 OCA], [http://pdbe.org/5yo8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5yo8 RCSB], [http://www.ebi.ac.uk/pdbsum/5yo8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5yo8 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Thousands of terpenes have been identified to date. However, only two classes of enzymes are known to be involved in their biosynthesis, and each class has characteristic amino-acid motifs. We recently identified a novel large-terpene (C25/C30/C35) synthase, which shares no motifs with known enzymes. To elucidate the molecular mechanism of this enzyme, we determined the crystal structure of a large-beta-prene synthase from B. alcalophilus (BalTS). Surprisingly, the overall structure of BalTS is similar to that of the alpha-domain of class I terpene synthases although their primary structures are totally different from each other. Two novel aspartate-rich motifs, DYLDNLxD and DY(F,L,W)IDxxED, are identified, and mutations of any one of the aspartates eliminate its enzymatic activity. The present work leads us to propose a new subclass of terpene synthases, class IB, which is probably responsible for large-terpene biosynthesis. | ||
+ | |||
+ | Crystal structure and functional analysis of large-terpene synthases belonging to a newly found subclass.,Fujihashi M, Sato T, Tanaka Y, Yamamoto D, Nishi T, Ueda D, Murakami M, Yasuno Y, Sekihara A, Fuku K, Shinada T, Miki K Chem Sci. 2018 Mar 16;9(15):3754-3758. doi: 10.1039/c8sc00289d. eCollection 2018 , Apr 21. PMID:29780507<ref>PMID:29780507</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 5yo8" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Bacillus alcalophilus atcc 27647]] | [[Category: Bacillus alcalophilus atcc 27647]] | ||
+ | [[Category: Large Structures]] | ||
[[Category: Fujihashi, M]] | [[Category: Fujihashi, M]] | ||
[[Category: Miki, K]] | [[Category: Miki, K]] | ||
[[Category: Lyase]] | [[Category: Lyase]] | ||
[[Category: Terpene synthase]] | [[Category: Terpene synthase]] |
Revision as of 12:43, 25 December 2019
Crystal structure of beta-C25/C30/C35-prene synthase
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