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Ribosome 3D structures
From Proteopedia
(Difference between revisions)
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**[[2zm6]], [[1n36]], [[1j5e]], [[3oto]], [[5wnq]], [[5wnr]], [[5wns]], [[5wnt]], [[5wnu]], [[5wnv]] - Tt30S ribosomal subunit+THX+16S rRNA – ''Thermus thermophilus''<br /> | **[[2zm6]], [[1n36]], [[1j5e]], [[3oto]], [[5wnq]], [[5wnr]], [[5wns]], [[5wnt]], [[5wnu]], [[5wnv]] - Tt30S ribosomal subunit+THX+16S rRNA – ''Thermus thermophilus''<br /> | ||
**[[2vqe]], [[2vqf]], [[2uuc]], [[2e5l]], [[2uu9]], [[2uua]], [[2uub]], [[6cao]], [[6caq]], [[6cas]] - Tt30S ribosomal subunit+16S rRNA+RNA fragment<br /> | **[[2vqe]], [[2vqf]], [[2uuc]], [[2e5l]], [[2uu9]], [[2uua]], [[2uub]], [[6cao]], [[6caq]], [[6cas]] - Tt30S ribosomal subunit+16S rRNA+RNA fragment<br /> | ||
| - | **[[ | + | **[[4v6c]] |
[[1i94]], [[1fka]], [[4dr1]] - Tt30S ribosomal subunit+16S rRNA<br /> | [[1i94]], [[1fka]], [[4dr1]] - Tt30S ribosomal subunit+16S rRNA<br /> | ||
**[[4duy]], [[4duz]], [[4dv0]], [[4dv1]], [[4dv2]], [[4dv3]], [[4dv4]], [[4dv5]], [[4dv6]], [[4dv7]] - Tt30S ribosomal subunit+16S rRNA (mutant)<br /> | **[[4duy]], [[4duz]], [[4dv0]], [[4dv1]], [[4dv2]], [[4dv3]], [[4dv4]], [[4dv5]], [[4dv6]], [[4dv7]] - Tt30S ribosomal subunit+16S rRNA (mutant)<br /> | ||
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**[[1i95]], [[1i97]], [[2hhh]], [[2f4v]], [[4dr3]], [[6cap]], [[6car]] - Tt30S ribosomal subunit+16S rRNA+antibiotic<br /> | **[[1i95]], [[1i97]], [[2hhh]], [[2f4v]], [[4dr3]], [[6cap]], [[6car]] - Tt30S ribosomal subunit+16S rRNA+antibiotic<br /> | ||
**[[1hnx]], [[1hnw]], [[1hnz]], [[1fjg]], [[4aqy]], [[4dr5]], [[4dr6]], [[4dr7]], [[4khp]] - Tt30S ribosomal subunit+16S rRNA+mRNA fragment+antibiotic <br /> | **[[1hnx]], [[1hnw]], [[1hnz]], [[1fjg]], [[4aqy]], [[4dr5]], [[4dr6]], [[4dr7]], [[4khp]] - Tt30S ribosomal subunit+16S rRNA+mRNA fragment+antibiotic <br /> | ||
| - | **[[ | + | **[[4v7l]] - Tt30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+mRNA +16S rRNA+ antibiotic<br /> |
**[[6mpf]], [[6mpi]] - Tt30S ribosomal subunit +A-site tRNA-Arg +mRNA +16S rRNA+ antibiotic<br /> | **[[6mpf]], [[6mpi]] - Tt30S ribosomal subunit +A-site tRNA-Arg +mRNA +16S rRNA+ antibiotic<br /> | ||
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**[[2ftc]] – b50S subunit – bovine - Cryo_EM<br /> | **[[2ftc]] – b50S subunit – bovine - Cryo_EM<br /> | ||
**[[5x8t]] – s50S ribosomal subunit - Cryo-EM<br /> | **[[5x8t]] – s50S ribosomal subunit - Cryo-EM<br /> | ||
| - | **[[ | + | **[[4v7l]], [[4v7m]], [[3v6w]], [[3v6x]], [[3zne]], [[4k0m]], [[4k0q]] - Tt50S subunit <br /> |
| - | **[[ | + | **[[4v6c]] - Ec50S subunit<br /> |
**[[6gbz]], [[6gc0]], [[6gc4]], [[6gc6]], [[6gc7]], [[6gc8]], [[6ofx]] - Ec50S subunit - Cryo_EM<br /> | **[[6gbz]], [[6gc0]], [[6gc4]], [[6gc6]], [[6gc7]], [[6gc8]], [[6ofx]] - Ec50S subunit - Cryo_EM<br /> | ||
**[[2zjq]], [[2zjr]], [[1nkw]] - Dr50S subunit – ''Deinococcus radiodurans''<br /> | **[[2zjq]], [[2zjr]], [[1nkw]] - Dr50S subunit – ''Deinococcus radiodurans''<br /> | ||
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*60S subunit + various proteins | *60S subunit + various proteins | ||
| - | **[[ | + | **[[4v6x]] – h60S subunit + P0 + P1 + P2 - Cryo EM<br /> |
| - | **[[ | + | **[[4v6c]] – y60S subunit + P0 + P1 + P2 - Cryo EM<br /> |
**[[4v8t]] – y60S subunit + P0 + P1 + P2 + ARX1 - Cryo EM<br /> | **[[4v8t]] – y60S subunit + P0 + P1 + P2 + ARX1 - Cryo EM<br /> | ||
| - | **[[ | + | **[[4v7r]] – y60S subunit + 5S rRNA + 5.8S rRNA + 25S rRNA + P0<br /> |
**[[6em5]], [[6em4]], [[6em3]], [[6elz]], [[6em1]] – y60S ribosomal subunit + BRX1 + 5.8S rRNA + 25S RNA + CIC1 + ERB1 + HAS1 + MRT4 + NIP7 + ribosome biogenesis proteins + EIF-6 + nucleolar proteins – Cryo-EM<br /> | **[[6em5]], [[6em4]], [[6em3]], [[6elz]], [[6em1]] – y60S ribosomal subunit + BRX1 + 5.8S rRNA + 25S RNA + CIC1 + ERB1 + HAS1 + MRT4 + NIP7 + ribosome biogenesis proteins + EIF-6 + nucleolar proteins – Cryo-EM<br /> | ||
**[[6cb1]], [[6c0f]], [[5z3g]] – y60S ribosomal subunit + 5.8S rRNA + 25S RNA + CIC1 + HAS1 + MRT4 + NIP7 + ribosome biogenesis proteins + RNA-processing protein + nucleolar proteins + pescadillo homolog – Cryo-EM<br /> | **[[6cb1]], [[6c0f]], [[5z3g]] – y60S ribosomal subunit + 5.8S rRNA + 25S RNA + CIC1 + HAS1 + MRT4 + NIP7 + ribosome biogenesis proteins + RNA-processing protein + nucleolar proteins + pescadillo homolog – Cryo-EM<br /> | ||
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**[[5anc]], [[5anb]], [[5an9]] – sm60S subunit + P0 + SbdS + EF-Tu – slime mold - Cryo EM<br /> | **[[5anc]], [[5anb]], [[5an9]] – sm60S subunit + P0 + SbdS + EF-Tu – slime mold - Cryo EM<br /> | ||
**[[6qkl]] – sm60S subunit + P0 + SbdS + EIF-6 - Cryo EM<br /> | **[[6qkl]] – sm60S subunit + P0 + SbdS + EIF-6 - Cryo EM<br /> | ||
| - | **[[ | + | **[[4v6w]] – Dm60S subunit + P0 – ''Drosophila melanogaster'' - Cryo EM<br /> |
**[[4v8p]] - Tet60S subunit+ 26S rRNA+ translation initiation factor 6 <br /> | **[[4v8p]] - Tet60S subunit+ 26S rRNA+ translation initiation factor 6 <br /> | ||
Revision as of 18:18, 8 January 2020
Updated on 08-January-2020 For a general description of the protein see Ribosome
1i94, 1fka, 4dr1 - Tt30S ribosomal subunit+16S rRNA
Proteopedia Page Contributors and Editors (what is this?)
Michal Harel, Wayne Decatur, Joel L. Sussman, Jaime Prilusky, Alexander Berchansky
