Sorting nexin

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</StructureSection>
</StructureSection>
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==3D structures of sorting nexin==
 
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Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
 
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{{#tree:id=OrganizedByTopic|openlevels=0|
 
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*Sorting nexin 1
 
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**[[2i4k]] – hSNX PX domain - human - NMR<br />
 
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**[[4fzs]] – hSNX BAR domain <br />
 
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*Sorting nexin 3
 
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**[[2mxc]] – hSNX - NMR <br />
 
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**[[2yps]] – hSNX PX domain <br />
 
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**[[5f0j]] – hSNX PX domain + VPS26 + VPS35<br />
 
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**[[5f0l]], [[5f0m]], [[5f0p]] – hSNX + VPS26 + VPS35 + DMT1 peptide<br />
 
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**[[1ocs]] – ySNX PX domain – yeast<br />
 
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**[[1ocu]] – ySNX PX domain + phosphatidylinositol-3-phosphate<br />
 
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*Sorting nexin 5
 
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**[[5tgh]], [[5tgi]], [[5wy2]] – hSNX PX domain + INCE<br />
 
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**[[3hpb]], [[3hpc]] – rSNX PX domain – rat<br />
 
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**[[5tp1]] – mSNX PX domain + INCE<br />
 
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*Sorting nexin 7
 
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**[[3iq2]] – hSNX PX domain <br />
 
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*Sorting nexin 9
 
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**[[2enm]] – SNX SH3 domain – mouse - NMR<br />
 
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**[[2rai]], [[2raj]], [[2rak]], [[3dyt]], [[3dyu]] – hSNX PX-BAR domain <br />
 
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**[[3lge]] – SNX residues 152-182 + aldolase – rabbit<br />
 
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*Sorting nexin 10
 
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**[[4on3]], [[4pzg]] – hSNX residues 1-201<br />
 
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*Sorting nexin 11
 
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**[[4ikb]], [[4ikd]] – hSNX PX domain <br />
 
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*Sorting nexin 12
 
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**[[2csk]] – hSNX PX domain <br />
 
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*Sorting nexin 14
 
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**[[4bgj]], [[4pqo]], [[4pqp]] – hSNX PX domain <br />
 
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*Sorting nexin 15
 
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**[[6mbi]], [[6ecm]] – hSNX PX domain <br />
 
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*Sorting nexin 16
 
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**[[5gw0]], [[5gw1]] – hSNX PX-coiled coll domain <br />
 
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*Sorting nexin 17
 
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**[[3fog]], [[3lui]] – hSNX PX domain <br />
 
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**[[4gxb]], [[4tkn]] – hSNX FERM domain + NPXY motif<br />
 
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*Sorting nexin 21
 
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**[[4ymr]] – mSNX PX/TPR domain <br />
 
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*Sorting nexin 22
 
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**[[2ett]] – hSNX PX domain - NMR<br />
 
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*Sorting nexin 23
 
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**[[6ee0]] – hSNX PX domain <br />
 
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*Sorting nexin 24
 
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**[[4az9]] – hSNX PX domain <br />
 
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*Sorting nexin 25
 
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**[[5xdz]] – SNX PX domain - zebrafish<br />
 
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**[[5woe]] – hSNX Phox hiomology domain - NMR<br />
 
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*Sorting nexin 27
 
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**[[4has]], [[5zn9]] – hSNX PX domain <br />
 
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**[[6sak]] – hSNX PX domain + otulin<br />
 
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**[[3qdo]], [[3qe1]] – rSNX PDZ domain/GIRK3 C terminal <br />
 
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**[[3qgl]] – rSNX PDZ domain + GIRK3 C terminal <br />
 
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**[[5elq]] – rSNX PDZ domain + DGKζ C terminal <br />
 
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**[[5em9]], [[5ema]], [[5emb]], [[4z8j]] – rSNX PDZ domain + PDZ-binding motif <br />
 
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**[[4p2a]] – rSNX PDZ domain + VPSA26 <br />
 
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**[[4z8j]] – rSNX PDZ domain + parathyroid hormone receptor PDZ domain <br />
 
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*Sorting nexin 32
 
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**[[6e8r]] – hSNX PX domain + INCE<br />
 
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*Sorting nexin 33
 
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**[[4akv]] – hSNX PH-BAR domain <br />
 
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*Sorting nexin
 
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**[[3hpb]], [[3hpc]] – rSNX PX domain – rat<br />
 
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}}
 
== References ==
== References ==
<references/>
<references/>
[[Category:Topic Page]]
[[Category:Topic Page]]

Revision as of 09:36, 9 February 2020

Structure of human sorting nexin-9 PX domain complex with sulfate (PDB entry 3dyt)

Drag the structure with the mouse to rotate

References

  1. ↑ Gallon M, Cullen PJ. Retromer and sorting nexins in endosomal sorting. Biochem Soc Trans. 2015 Feb;43(1):33-47. doi: 10.1042/BST20140290. PMID:25619244 doi:http://dx.doi.org/10.1042/BST20140290
  2. ↑ Zhong Q, Lazar CS, Tronchere H, Sato T, Meerloo T, Yeo M, Songyang Z, Emr SD, Gill GN. Endosomal localization and function of sorting nexin 1. Proc Natl Acad Sci U S A. 2002 May 14;99(10):6767-72. Epub 2002 May 7. PMID:11997453 doi:http://dx.doi.org/10.1073/pnas.092142699
  3. ↑ Mizutani R, Yamauchi J, Kusakawa S, Nakamura K, Sanbe A, Torii T, Miyamoto Y, Tanoue A. Sorting nexin 3, a protein upregulated by lithium, contains a novel phosphatidylinositol-binding sequence and mediates neurite outgrowth in N1E-115 cells. Cell Signal. 2009 Nov;21(11):1586-94. doi: 10.1016/j.cellsig.2009.06.005. Epub, 2009 Jul 2. PMID:19576982 doi:http://dx.doi.org/10.1016/j.cellsig.2009.06.005
  4. ↑ Koharudin LM, Furey W, Liu H, Liu YJ, Gronenborn AM. The phox domain of sorting nexin 5 lacks phosphatidylinositol 3-phosphate (PtdIns(3)P) specificity and preferentially binds to phosphatidylinositol 4,5-bisphosphate (PtdIns(4,5)P2). J Biol Chem. 2009 Aug 28;284(35):23697-707. Epub 2009 Jun 24. PMID:19553671 doi:http://dx.doi.org/M109.008995
  5. ↑ Xu L, Yin W, Xia J, Peng M, Li S, Lin S, Pei D, Shu X. An antiapoptotic role of sorting nexin 7 is required for liver development in zebrafish. Hepatology. 2012 Jun;55(6):1985-93. doi: 10.1002/hep.25560. Epub 2012 Apr 23. PMID:22213104 doi:http://dx.doi.org/10.1002/hep.25560
  6. ↑ Lundmark R, Carlsson SR. Sorting nexin 9 participates in clathrin-mediated endocytosis through interactions with the core components. J Biol Chem. 2003 Nov 21;278(47):46772-81. Epub 2003 Sep 2. PMID:12952949 doi:http://dx.doi.org/10.1074/jbc.M307334200
  7. ↑ Qin B, He M, Chen X, Pei D. Sorting nexin 10 induces giant vacuoles in mammalian cells. J Biol Chem. 2006 Dec 1;281(48):36891-6. Epub 2006 Sep 29. PMID:17012226 doi:http://dx.doi.org/10.1074/jbc.M608884200
  8. ↑ Li C, Ma W, Yin S, Liang X, Shu X, Pei D, Egan TM, Huang J, Pan A, Li Z. Sorting Nexin 11 Regulates Lysosomal Degradation of Plasma Membrane TRPV3. Traffic. 2016 May;17(5):500-14. doi: 10.1111/tra.12379. Epub 2016 Feb 23. PMID:26818531 doi:http://dx.doi.org/10.1111/tra.12379
  9. ↑ Zhao Y, Wang Y, Yang J, Wang X, Zhao Y, Zhang X, Zhang YW. Sorting nexin 12 interacts with BACE1 and regulates BACE1-mediated APP processing. Mol Neurodegener. 2012 Jun 18;7:30. doi: 10.1186/1750-1326-7-30. PMID:22709416 doi:http://dx.doi.org/10.1186/1750-1326-7-30
  10. ↑ Hussain NK, Diering GH, Sole J, Anggono V, Huganir RL. Sorting Nexin 27 regulates basal and activity-dependent trafficking of AMPARs. Proc Natl Acad Sci U S A. 2014 Aug 12;111(32):11840-5. doi:, 10.1073/pnas.1412415111. Epub 2014 Jul 28. PMID:25071192 doi:http://dx.doi.org/10.1073/pnas.1412415111
  11. ↑ Zhang J, Zhang X, Guo Y, Xu L, Pei D. Sorting nexin 33 induces mammalian cell micronucleated phenotype and actin polymerization by interacting with Wiskott-Aldrich syndrome protein. J Biol Chem. 2009 Aug 7;284(32):21659-69. doi: 10.1074/jbc.M109.007278. Epub 2009, Jun 1. PMID:19487689 doi:http://dx.doi.org/10.1074/jbc.M109.007278
  12. ↑ Kanzawa M, Hara S, Semba S, Yokozaki H, Hirokawa M, Itoh T. Sorting Nexin 2 (SNX2): a potential marker of active thyrocytes in normal and hyperfunctioning thyroid disorders. Appl Immunohistochem Mol Morphol. 2014 Apr;22(4):302-7. doi:, 10.1097/PAI.0b013e31828badd3. PMID:23531855 doi:http://dx.doi.org/10.1097/PAI.0b013e31828badd3

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Michal Harel, Alexander Berchansky

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