6km8

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m (Protected "6km8" [edit=sysop:move=sysop])
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'''Unreleased structure'''
 
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The entry 6km8 is ON HOLD until Paper Publication
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==Crystal Structure of Momordica charantia 7S globulin==
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<StructureSection load='6km8' size='340' side='right'caption='[[6km8]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6km8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Momordica_charantia Momordica charantia]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6KM8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6KM8 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6km8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6km8 OCA], [http://pdbe.org/6km8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6km8 RCSB], [http://www.ebi.ac.uk/pdbsum/6km8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6km8 ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Momordica charantia (Mc) seeds are widely used edible crop with high nutritional quality. The food and pharmaceutical industries use it as a natural anti-oxygenic agent. Herein, a ~52 kDa protein, which is a major part of seed proteome has been purified, biochemically characterized and structure has been determined. MALDI-ESI-MS identified peptide fragments and contig-deduced sequence suggested the protein to be homologous to 7S globulins. The crystal structure shows that protein has a bicupin fold similar to 7S globulins and the electron density for a copper and acetate ligand were observed in the C-terminal barrel domain. In silico study reveals that a tripeptide (VFK) from Mc7S possess a higher binding affinity for angiotensin converting enzyme (ACE) than already reported drug Lisinopril (LPR). The protein is a glycoprotein and highly stable under varying thermal and pH conditions due to its secondary structures. The DPPH (2,2-diphenyl-1-picryl-hydrazyl-hydrate) assay showed the protein to have an anti-oxygenic nature and can aid in scavenging free radical from sample. The protein can assist to enhance the nutritional and functional value of food by acting as a food antioxidant. Further, characterization of Mc7S required which might add in importance of Mc7S as antioxidant, anti-diabetic and anti-hypertensive.
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Authors: Kesari, P., Pratap, S., Dhankhar, P., Dalal, V., Kumar, P.
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Structural characterization and in-silico analysis of Momordica charantia 7S globulin for stability and ACE inhibition.,Kesari P, Pratap S, Dhankhar P, Dalal V, Mishra M, Singh PK, Chauhan H, Kumar P Sci Rep. 2020 Jan 24;10(1):1160. doi: 10.1038/s41598-020-58138-9. PMID:31980708<ref>PMID:31980708</ref>
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Description: Crystal Structure of Momordica charantia 7S globulin
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Kesari, P]]
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<div class="pdbe-citations 6km8" style="background-color:#fffaf0;"></div>
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[[Category: Pratap, S]]
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==See Also==
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*[[Histidine triad nucleotide-binding protein 3D structures|Histidine triad nucleotide-binding protein 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Momordica charantia]]
[[Category: Dalal, V]]
[[Category: Dalal, V]]
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[[Category: Kumar, P]]
 
[[Category: Dhankhar, P]]
[[Category: Dhankhar, P]]
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[[Category: Kesari, P]]
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[[Category: Kumar, P]]
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[[Category: Pratap, S]]
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[[Category: 7s globulin bi-cupin fold]]
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[[Category: Copper-ion]]
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[[Category: Glycosylated]]
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[[Category: Plant protein]]

Revision as of 04:12, 13 February 2020

Crystal Structure of Momordica charantia 7S globulin

PDB ID 6km8

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