6fjl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "6fjl" [edit=sysop:move=sysop])
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 6fjl is ON HOLD
+
==Structure of IbpS from Dickeya dadantii==
 +
<StructureSection load='6fjl' size='340' side='right'caption='[[6fjl]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[6fjl]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Dicd3 Dicd3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6FJL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6FJL FirstGlance]. <br>
 +
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
 +
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[6hhb|6hhb]]</td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Dda3937_02937 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=198628 DICD3])</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6fjl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6fjl OCA], [http://pdbe.org/6fjl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6fjl RCSB], [http://www.ebi.ac.uk/pdbsum/6fjl PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6fjl ProSAT]</span></td></tr>
 +
</table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Few secreted proteins involved in plant infection common to necrotrophic bacteria, fungi and oomycetes have been identified except for plant cell wall-degrading enzymes. Here we study a family of iron-binding proteins that is present in Gram-negative and Gram-positive bacteria, fungi, oomycetes and some animals. Homolog proteins in the phytopathogenic bacterium Dickeya dadantii (IbpS) and the fungal necrotroph Botrytis cinerea (BcIbp) are involved in plant infection. IbpS is secreted, can bind iron and copper, and protects the bacteria against H2O2-induced death. Its 1.7 A crystal structure reveals a classical Venus Fly trap fold that forms dimers in solution and in the crystal. We propose that secreted Ibp proteins binds exogenous metals and thus limit intracellular metal accumulation and ROS formation in the microorganisms.
-
Authors: Gueguen-Chaignon, V., Condemine, G., Terradot, L.
+
A secreted metal-binding protein protects necrotrophic phytopathogens from reactive oxygen species.,Liu L, Gueguen-Chaignon V, Goncalves IR, Rascle C, Rigault M, Dellagi A, Loisel E, Poussereau N, Rodrigue A, Terradot L, Condemine G Nat Commun. 2019 Oct 24;10(1):4853. doi: 10.1038/s41467-019-12826-x. PMID:31649262<ref>PMID:31649262</ref>
-
Description: Structure of IbpS from Dickeya dadantii
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
-
[[Category: Terradot, L]]
+
<div class="pdbe-citations 6fjl" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Dicd3]]
 +
[[Category: Large Structures]]
[[Category: Condemine, G]]
[[Category: Condemine, G]]
[[Category: Gueguen-Chaignon, V]]
[[Category: Gueguen-Chaignon, V]]
 +
[[Category: Terradot, L]]
 +
[[Category: Metal binding protein]]
 +
[[Category: Substrate binding protein bacterial effector venus fly-trap]]

Revision as of 07:21, 19 February 2020

Structure of IbpS from Dickeya dadantii

PDB ID 6fjl

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools