This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
5gkh
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==Structure of EndoMS-dsDNA2 complex== | ==Structure of EndoMS-dsDNA2 complex== | ||
| - | <StructureSection load='5gkh' size='340' side='right' caption='[[5gkh]], [[Resolution|resolution]] 2.90Å' scene=''> | + | <StructureSection load='5gkh' size='340' side='right'caption='[[5gkh]], [[Resolution|resolution]] 2.90Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5gkh]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5GKH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5GKH FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5gkh]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_kodakaraensis_(strain_kod1) Pyrococcus kodakaraensis (strain kod1)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5GKH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5GKH FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5gke|5gke]], [[5gkf|5gkf]], [[5gkg|5gkg]], [[5gki|5gki]], [[5gkj|5gkj]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5gke|5gke]], [[5gkf|5gkf]], [[5gkg|5gkg]], [[5gki|5gki]], [[5gkj|5gkj]]</td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TK1898 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=69014 Pyrococcus kodakaraensis (strain KOD1)])</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5gkh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5gkh OCA], [http://pdbe.org/5gkh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5gkh RCSB], [http://www.ebi.ac.uk/pdbsum/5gkh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5gkh ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5gkh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5gkh OCA], [http://pdbe.org/5gkh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5gkh RCSB], [http://www.ebi.ac.uk/pdbsum/5gkh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5gkh ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| Line 19: | Line 20: | ||
</div> | </div> | ||
<div class="pdbe-citations 5gkh" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 5gkh" style="background-color:#fffaf0;"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Endonuclease 3D structures|Endonuclease 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Hijikata, A]] | [[Category: Hijikata, A]] | ||
[[Category: Ishino, S]] | [[Category: Ishino, S]] | ||
Revision as of 10:08, 26 February 2020
Structure of EndoMS-dsDNA2 complex
| |||||||||||
