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Transcriptional activator

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*<scene name='55/553105/Cv/6'>1st K soordination site</scene>.
*<scene name='55/553105/Cv/6'>1st K soordination site</scene>.
*<scene name='55/553105/Cv/7'>2nd K soordination site</scene>. Water molecules are shown as red spheres.
*<scene name='55/553105/Cv/7'>2nd K soordination site</scene>. Water molecules are shown as red spheres.
 +
== 3D Structures of transcriptional activator==
 +
[[Transcriptional activator 3D structures]]
 +
</StructureSection>
</StructureSection>
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**[[2qcx]] – BsTA (mutant) + pyrimidine derivative<br />
**[[2qcx]] – BsTA (mutant) + pyrimidine derivative<br />
-
*LasR transcriptional activator
+
*LasR transcriptional activator or transcriptional regulator LasR
-
**[[2uv0]] – PaTA LBD – ''Pseudomonas aeruginosa''<br />
+
**[[6mww]] – PaTA – ''Pseudomonas aeruginosa''<br />
 +
**[[2uv0]] – PaTA LBD residues 1-173<br />
**[[3ix3]] – PaTA LBD + oxo-dodecanoyl-homoserine lactone<br />
**[[3ix3]] – PaTA LBD + oxo-dodecanoyl-homoserine lactone<br />
**[[3ix4]], [[3ix8]], [[3jpu]], [[6d6a]], [[6d6b]], [[6d6c]], [[6d6d]], [[6d6l]], [[6d6m]], [[6d6n]], [[6d6o]], [[6d6p]] – PaTA LBD + benzoate derivative<br />
**[[3ix4]], [[3ix8]], [[3jpu]], [[6d6a]], [[6d6b]], [[6d6c]], [[6d6d]], [[6d6l]], [[6d6m]], [[6d6n]], [[6d6o]], [[6d6p]] – PaTA LBD + benzoate derivative<br />
 +
**[[6mwl]] – PaTA + oxothiolan derivative<br />
 +
**[[6mwh]] – PaTA + acetamide derivative<br />
**[[4ng2]] – PaTA LBD + protein<br />
**[[4ng2]] – PaTA LBD + protein<br />
 +
**[[6mwz]] – PaTA (mutant) + peptide<br />
*CadC transcriptional activator; domains - DBD 1-107; periplasmic 188-512
*CadC transcriptional activator; domains - DBD 1-107; periplasmic 188-512
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**[[4lq2]], [[4lq5]], [[4m4g]] – StTA C terminal + acetylserine<br />
**[[4lq2]], [[4lq5]], [[4m4g]] – StTA C terminal + acetylserine<br />
**[[1al3]] – TA cofactor binding domain – ''Klebsiella aerogenes''<br />
**[[1al3]] – TA cofactor binding domain – ''Klebsiella aerogenes''<br />
 +
**[[5z50]] – PaTA regulatory domain <br />
 +
**[[5z4y]] – PaTA NTD domain <br />
*HlyU transcriptional activator
*HlyU transcriptional activator
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**[[4k2e]], [[4ooi]] – TA - ''Vibrio cholerae''<br />
**[[4k2e]], [[4ooi]] – TA - ''Vibrio cholerae''<br />
**[[3jth]] – VvTA <br />
**[[3jth]] – VvTA <br />
 +
**[[5znx]] – TA + inhibitor - ''Vibrio vulnificus''<br />
*Aft2 transcriptional activator
*Aft2 transcriptional activator
**[[4lmg]] – yTA + DNA<br />
**[[4lmg]] – yTA + DNA<br />
 +
 +
*Cmpr transcriptional activator
 +
 +
**[[5z49]] – TA effector-binding domain + ribulose bisphosphate – Synechococcus elongatus<br />
 +
 +
*Mga transcriptional activator
 +
 +
**[[5way]] – TA – Streptococcus pneumoniae<br />
 +
 +
*RhaR transcriptional activator
 +
 +
**[[5u9e]], [[5u93]] – TA regulatory domain – Bacteria latreille<br />
 +
 +
*Spt7 transcriptional activator
 +
 +
**[[6t9k]], [[6t9i]] – yTA in SAGA – Cryo EM<br />
 +
}}
}}
== References ==
== References ==
<references/>
<references/>
[[Category:Topic Page]]
[[Category:Topic Page]]

Revision as of 09:33, 4 March 2020

Structure of transcriptional activator C-Myb DNA-binding domain (deeppink) complex with DNA, CAAT/enhancer binding protein β (cyan and green) and K+ ion (purple) (PDB entry 1h89)

Drag the structure with the mouse to rotate

3D Structures of transcriptional activator

Updated on 04-March-2020

References

  1. ↑ Titz B, Thomas S, Rajagopala SV, Chiba T, Ito T, Uetz P. Transcriptional activators in yeast. Nucleic Acids Res. 2006 Feb 7;34(3):955-67. Print 2006. PMID:16464826 doi:http://dx.doi.org/34/3/955

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky

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