1au6

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[[Image:1au6.gif|left|200px]]
[[Image:1au6.gif|left|200px]]
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{{Structure
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<!--
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|PDB= 1au6 |SIZE=350|CAPTION= <scene name='initialview01'>1au6</scene>
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The line below this paragraph, containing "STRUCTURE_1au6", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=BPT:BIS(TRANS-PLATINUM+ETHYLENEDIAMINE+DIAMINE+CHLORO)COMPLEX'>BPT</scene>, <scene name='pdbligand=DA:2&#39;-DEOXYADENOSINE-5&#39;-MONOPHOSPHATE'>DA</scene>, <scene name='pdbligand=DC:2&#39;-DEOXYCYTIDINE-5&#39;-MONOPHOSPHATE'>DC</scene>, <scene name='pdbligand=DG:2&#39;-DEOXYGUANOSINE-5&#39;-MONOPHOSPHATE'>DG</scene>, <scene name='pdbligand=DT:THYMIDINE-5&#39;-MONOPHOSPHATE'>DT</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY=
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|GENE=
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|DOMAIN=
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{{STRUCTURE_1au6| PDB=1au6 | SCENE= }}
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|RELATEDENTRY=
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1au6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1au6 OCA], [http://www.ebi.ac.uk/pdbsum/1au6 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1au6 RCSB]</span>
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}}
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'''SOLUTION STRUCTURE OF DNA D(CATGCATG) INTERSTRAND-CROSSLINKED BY BISPLATIN COMPOUND (1,1/T,T), NMR, MINIMIZED AVERAGE STRUCTURE'''
'''SOLUTION STRUCTURE OF DNA D(CATGCATG) INTERSTRAND-CROSSLINKED BY BISPLATIN COMPOUND (1,1/T,T), NMR, MINIMIZED AVERAGE STRUCTURE'''
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==About this Structure==
==About this Structure==
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1AU6 is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/ ]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AU6 OCA].
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Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AU6 OCA].
==Reference==
==Reference==
A novel DNA structure induced by the anticancer bisplatinum compound crosslinked to a GpC site in DNA., Yang D, van Boom SS, Reedijk J, van Boom JH, Farrell N, Wang AH, Nat Struct Biol. 1995 Jul;2(7):577-8. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/7664126 7664126]
A novel DNA structure induced by the anticancer bisplatinum compound crosslinked to a GpC site in DNA., Yang D, van Boom SS, Reedijk J, van Boom JH, Farrell N, Wang AH, Nat Struct Biol. 1995 Jul;2(7):577-8. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/7664126 7664126]
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[[Category: Protein complex]]
 
[[Category: Boom, J H.Van.]]
[[Category: Boom, J H.Van.]]
[[Category: Boom, S S.G E.Van.]]
[[Category: Boom, S S.G E.Van.]]
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[[Category: Wang, A H.J.]]
[[Category: Wang, A H.J.]]
[[Category: Yang, D.]]
[[Category: Yang, D.]]
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[[Category: bisplatinum compound (1,1/t,t)]]
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[[Category: Deoxyribonucleic acid]]
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[[Category: deoxyribonucleic acid]]
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[[Category: Dna]]
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[[Category: dna]]
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[[Category: Dumbbell structure]]
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[[Category: dumbbell structure]]
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[[Category: Interstrand crosslink]]
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[[Category: interstrand crosslink]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 10:41:42 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 18:47:37 2008''
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Revision as of 07:41, 2 May 2008

Template:STRUCTURE 1au6

SOLUTION STRUCTURE OF DNA D(CATGCATG) INTERSTRAND-CROSSLINKED BY BISPLATIN COMPOUND (1,1/T,T), NMR, MINIMIZED AVERAGE STRUCTURE


Overview

The bifunctional platinum compound, [(trans-PtCI(NH)3)2)2(H2N(CH2)4NH2)]2+, forms a stable adduct with the self-complementary DNA oligomer CATGCATG, with the two platinum atoms coordinated at the N7 positions of the two symmetrical G4 nucleotides. The NMR-derived structure shows that the DNA octamer forms a novel hairpin structure with the platinated G4 residue adopting a syn conformation and the guanine base in the minor groove. Two such hairpins stack end-over-end and are linked together by the butanediamine tether to form a dumbbell structure. Such unusual structural distortion is different from that of the anticancer drug cisplatin-DNA adduct and may provide clues to explain the distinct biological activities of the two compounds.

About this Structure

Full crystallographic information is available from OCA.

Reference

A novel DNA structure induced by the anticancer bisplatinum compound crosslinked to a GpC site in DNA., Yang D, van Boom SS, Reedijk J, van Boom JH, Farrell N, Wang AH, Nat Struct Biol. 1995 Jul;2(7):577-8. PMID:7664126 Page seeded by OCA on Fri May 2 10:41:42 2008

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