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Spike protein
From Proteopedia
(Difference between revisions)
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* Human virus spike protein | * Human virus spike protein | ||
| - | **[[5wrg]], [[5xlr]] – hscvSpi – human SARS | + | **[[5wrg]], [[5xlr]] – hscvSpi – human SARS-CoV – Cryo EM <br /> |
**[[6crv]], [[6crw]], [[6crx]], [[6crz]], [[6cs0]], [[6cs1]] – hscvSpi (mutant) – Cryo EM <br /> | **[[6crv]], [[6crw]], [[6crx]], [[6crz]], [[6cs0]], [[6cs1]] – hscvSpi (mutant) – Cryo EM <br /> | ||
**[[1wnc]] – hscvSpi fusion core 900-1184<br /> | **[[1wnc]] – hscvSpi fusion core 900-1184<br /> | ||
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**[[1wyy]] – hscvSpi 885-1189<br /> | **[[1wyy]] – hscvSpi 885-1189<br /> | ||
**[[1zv7]], [[1zv8]], [[1zva]], [[1zvb]] – hscvSpi 1150-1193<br /> | **[[1zv7]], [[1zv8]], [[1zva]], [[1zvb]] – hscvSpi 1150-1193<br /> | ||
| - | **[[2ajf]] – hscvSpi RBD + | + | **[[2ajf]] – hscvSpi RBD + ACEH<br /> |
**[[2ghw]], [[3bgf]], [[2dd8]] – hscvSpi RBD + antibody<br /> | **[[2ghw]], [[3bgf]], [[2dd8]] – hscvSpi RBD + antibody<br /> | ||
| + | **[[6acg]], [[6acj]], [[6ack]], [[6cs2]] – hscvSpi + ACE2 - Cryo EM<br /> | ||
**[[6u7h]] – hcv229Spi – human coronavirus 229E – Cryo EM <br /> | **[[6u7h]] – hcv229Spi – human coronavirus 229E – Cryo EM <br /> | ||
**[[6atk]] – hcv229Spi RBD + aminopeptidase <br /> | **[[6atk]] – hcv229Spi RBD + aminopeptidase <br /> | ||
**[[5x58]], [[5x5b]] – Spi – human SARS coronavirus BJ01 – Cryo EM <br /> | **[[5x58]], [[5x5b]] – Spi – human SARS coronavirus BJ01 – Cryo EM <br /> | ||
| + | **[[6lxt]] – CV19Spi HR1+HR2 domains 910-988, 1162-1206 – CoVid-19 <br /> | ||
**[[6vsb]], [[6vxx]], [[6vyb]] – hsc2Spi – human SARS coronavirus 2 – Cryo EM <br /> | **[[6vsb]], [[6vxx]], [[6vyb]] – hsc2Spi – human SARS coronavirus 2 – Cryo EM <br /> | ||
| - | **[[6m0j]] – hsc2Spi RBD + ACE2<br /> | + | **[[6m0j]], [[3d0g]], [[3d0h]], [[3d0i]], [[3sci]], [[3scj]], [[3sck]], [[3scl]] – hsc2Spi RBD + ACE2<br /> |
**[[5szs]] – hcnSpi – human coronavirus NL63 - Cryo EM<br /> | **[[5szs]] – hcnSpi – human coronavirus NL63 - Cryo EM<br /> | ||
**[[2ieq]] – hcnSpi residues 981-1038, 1242-1283 <br /> | **[[2ieq]] – hcnSpi residues 981-1038, 1242-1283 <br /> | ||
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**[[5x4r]], [[5x4s]] – McvSpi N-terminal – Cryo EM <br /> | **[[5x4r]], [[5x4s]] – McvSpi N-terminal – Cryo EM <br /> | ||
**[[4zpw]], [[4kqz]] – McvSpi RBD<br /> | **[[4zpw]], [[4kqz]] – McvSpi RBD<br /> | ||
| + | |||
| + | * Human virus spike protein complex | ||
| + | |||
**[[4kr0]] – McvSpi RBD + CD26<br /> | **[[4kr0]] – McvSpi RBD + CD26<br /> | ||
**[[6pz8]] – McvSpi + antibody – Cryo EM <br /> | **[[6pz8]] – McvSpi + antibody – Cryo EM <br /> | ||
**[[6j11]] – McvSpi N-terminal + antibody<br /> | **[[6j11]] – McvSpi N-terminal + antibody<br /> | ||
| + | **[[5yy5]] – McvSpi RBD + antibody<br /> | ||
| + | |||
| + | |||
*Non-human virus spike protein | *Non-human virus spike protein | ||
**[[4h14]] – Spi lectin domain 7-290 - bovine coronavirus<br /> | **[[4h14]] – Spi lectin domain 7-290 - bovine coronavirus<br /> | ||
| - | **[[6b7n]] – Spi – porcine delta coronavirus – Cryo EM <br /> | + | **[[6b7n]], [[6bfu]] – Spi – porcine delta coronavirus – Cryo EM <br /> |
**[[6u7k]], [[6vv5]] – Spi – porcine epidemic diarrhea virus – Cryo EM <br /> | **[[6u7k]], [[6vv5]] – Spi – porcine epidemic diarrhea virus – Cryo EM <br /> | ||
**[[6qfy]] – Spi lectin domain 15-300 - porcine hemagglutinating encephalomyelitis virus<br /> | **[[6qfy]] – Spi lectin domain 15-300 - porcine hemagglutinating encephalomyelitis virus<br /> | ||
| + | **[[4fsc]] – Spi RBD + aminopeptidase – porcine respiratory coronavirus <br /> | ||
**[[6jhy]] – Spi N-terminal – camel coronavirus HKU23<br /> | **[[6jhy]] – Spi N-terminal – camel coronavirus HKU23<br /> | ||
**[[6jx7]] – Spi – feline infectious peritonitis virus – Cryo EM <br /> | **[[6jx7]] – Spi – feline infectious peritonitis virus – Cryo EM <br /> | ||
Revision as of 14:51, 7 April 2020
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3D Structures of spike protein
Updated on 07-April-2020
References
- ↑ Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644
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Michal Harel, Alexander Berchansky, Eric Martz, Joel L. Sussman
