6p5u
From Proteopedia
(Difference between revisions)
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| - | '''Unreleased structure''' | ||
| - | + | ==Structure of an enoyl-CoA hydratase/aldolase isolated from a lignin-degrading consortium== | |
| + | <StructureSection load='6p5u' size='340' side='right'caption='[[6p5u]], [[Resolution|resolution]] 2.10Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[6p5u]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6P5U OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6P5U FirstGlance]. <br> | ||
| + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=B3P:2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>B3P</scene>, <scene name='pdbligand=COA:COENZYME+A'>COA</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6p5u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6p5u OCA], [http://pdbe.org/6p5u PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6p5u RCSB], [http://www.ebi.ac.uk/pdbsum/6p5u PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6p5u ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | In the context of increasing demand for renewable alternatives of fuels and chemicals, the valorization of lignin emerges as a value-adding strategy in biorefineries and an alternative to petroleum-derived molecules. One of the compounds derived from lignin is ferulic acid (FA), which can be converted into valuable molecules such as vanillin. In microorganisms, FA biotransformation into vanillin can occur via a two-step reaction catalyzed by the sequential activity of a feruloyl-CoA synthetase (FCS) and an feruloyl-CoA hydratase-lyase (FCHL), which could be exploited industrially. In this study, a prokaryotic FCHL derived from a lignin-degrading microbial consortium (named LM-FCHL) was cloned, successfully expressed in soluble form and purified. The crystal structure was solved and refined at 2.1 A resolution. The LM-FCHL is a hexamer composed of a dimer of trimers, which showed to be quite stable under extreme pH conditions. Finally, small angle X-ray scattering corroborates the hexameric state in solution and indicates flexibility in the protein structure. The present study contributes to the field of lignin valorization to valuable molecules by establishing the biophysical and structural characterization for a novel FCHL member of unique characteristics. | ||
| - | + | The structure of a prokaryotic feruloyl-CoA hydratase-lyase from a lignin-degrading consortium with high oligomerization stability under extreme pHs.,Liberato MV, Araujo JN, Sodre V, Goncalves TA, Vilela N, Moraes EC, Garcia W, Squina FM Biochim Biophys Acta Proteins Proteom. 2020 Mar;1868(3):140344. doi:, 10.1016/j.bbapap.2019.140344. Epub 2019 Dec 10. PMID:31841665<ref>PMID:31841665</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| + | <div class="pdbe-citations 6p5u" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Liberato, M V]] | ||
| + | [[Category: Squina, F M]] | ||
| + | [[Category: Enoyl-coa hydratase/aldolase]] | ||
| + | [[Category: Ferulic acid]] | ||
| + | [[Category: Lignin]] | ||
| + | [[Category: Lyase]] | ||
| + | [[Category: Vanillin]] | ||
Revision as of 06:51, 8 April 2020
Structure of an enoyl-CoA hydratase/aldolase isolated from a lignin-degrading consortium
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