6tor
From Proteopedia
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==human O-phosphoethanolamine phospho-lyase== | ==human O-phosphoethanolamine phospho-lyase== | ||
| - | <StructureSection load='6tor' size='340' side='right'caption='[[6tor]]' scene=''> | + | <StructureSection load='6tor' size='340' side='right'caption='[[6tor]], [[Resolution|resolution]] 2.05Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6TOR OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6TOR FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6tor]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6TOR OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6TOR FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6tor FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6tor OCA], [http://pdbe.org/6tor PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6tor RCSB], [http://www.ebi.ac.uk/pdbsum/6tor PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6tor ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PMP:4-DEOXY-4-AMINOPYRIDOXAL-5-PHOSPHATE'>PMP</scene></td></tr> |
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ETNPPL, AGXT2L1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr> | ||
| + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ethanolamine-phosphate_phospho-lyase Ethanolamine-phosphate phospho-lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.3.2 4.2.3.2] </span></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6tor FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6tor OCA], [http://pdbe.org/6tor PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6tor RCSB], [http://www.ebi.ac.uk/pdbsum/6tor PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6tor ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [[http://www.uniprot.org/uniprot/AT2L1_HUMAN AT2L1_HUMAN]] Catalyzes the pyridoxal-phosphate-dependent breakdown of phosphoethanolamine, converting it to ammonia, inorganic phosphate and acetaldehyde.<ref>PMID:22241472</ref> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Human O-phosphoethanolamine phospho-lyase (hEtnppl; EC 4.2.3.2) is a pyridoxal 5'-phosphate-dependent enzyme that catalyzes the degradation of O-phosphoethanolamine (PEA) into acetaldehyde, phosphate and ammonia. Physiologically, the enzyme is involved in phospholipid metabolism, as PEA is the precursor of phosphatidylethanolamine in the CDP-ethanolamine (Kennedy) pathway. Here, the crystal structure of hEtnppl in complex with pyridoxamine 5'-phosphate was determined at 2.05 A resolution by molecular replacement using the structure of A1RDF1 from Arthrobacter aurescens TC1 (PDB entry 5g4i) as the search model. Structural analysis reveals that the two proteins share the same general fold and a similar arrangement of active-site residues. These results provide novel and useful information for the complete characterization of the human enzyme. | ||
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| + | Structural characterization of human O-phosphoethanolamine phospho-lyase.,Vettraino C, Peracchi A, Donini S, Parisini E Acta Crystallogr F Struct Biol Commun. 2020 Apr 1;76(Pt 4):160-167. doi:, 10.1107/S2053230X20002988. Epub 2020 Apr 1. PMID:32254049<ref>PMID:32254049</ref> | ||
| + | |||
| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 6tor" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Ethanolamine-phosphate phospho-lyase]] | ||
| + | [[Category: Human]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Donini S]] | + | [[Category: Donini, S]] |
| - | [[Category: Parisini E]] | + | [[Category: Parisini, E]] |
| - | [[Category: Vettraino C]] | + | [[Category: Vettraino, C]] |
| + | [[Category: Lyase]] | ||
| + | [[Category: O-phosphoethanolamine phospho-lyase]] | ||
| + | [[Category: Phospholipid metabolism]] | ||
| + | [[Category: Pyridoxal 5'-phosphate-dependent enzyme]] | ||
Revision as of 06:07, 22 April 2020
human O-phosphoethanolamine phospho-lyase
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