6kl4
From Proteopedia
(Difference between revisions)
Line 1: | Line 1: | ||
==Crystal structure of MavC-UBE2N-Ub== | ==Crystal structure of MavC-UBE2N-Ub== | ||
- | <StructureSection load='6kl4' size='340' side='right'caption='[[6kl4]]' scene=''> | + | <StructureSection load='6kl4' size='340' side='right'caption='[[6kl4]], [[Resolution|resolution]] 2.85Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6KL4 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6KL4 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6kl4]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_33152 Atcc 33152] and [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6KL4 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6KL4 FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6kl4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6kl4 OCA], [http://pdbe.org/6kl4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6kl4 RCSB], [http://www.ebi.ac.uk/pdbsum/6kl4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6kl4 ProSAT]</span></td></tr> | + | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">C3927_10720 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=446 ATCC 33152]), UBE2N, BLU ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr> |
+ | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/E2_ubiquitin-conjugating_enzyme E2 ubiquitin-conjugating enzyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.2.23 2.3.2.23] </span></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6kl4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6kl4 OCA], [http://pdbe.org/6kl4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6kl4 RCSB], [http://www.ebi.ac.uk/pdbsum/6kl4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6kl4 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | == Function == | ||
+ | [[http://www.uniprot.org/uniprot/UBE2N_HUMAN UBE2N_HUMAN]] The UBE2V1-UBE2N and UBE2V2-UBE2N heterodimers catalyze the synthesis of non-canonical 'Lys-63'-linked polyubiquitin chains. This type of polyubiquitination does not lead to protein degradation by the proteasome. Mediates transcriptional activation of target genes. Plays a role in the control of progress through the cell cycle and differentiation. Plays a role in the error-free DNA repair pathway and contributes to the survival of cells after DNA damage. Acts together with the E3 ligases, HLTF and SHPRH, in the 'Lys-63'-linked poly-ubiquitination of PCNA upon genotoxic stress, which is required for DNA repair. Appears to act together with E3 ligase RNF5 in the 'Lys-63'-linked polyubiquitination of JKAMP thereby regulating JKAMP function by decreasing its association with components of the proteasome and ERAD. Promotes TRIM5 capsid-specific restriction activity and the UBE2V1-UBE2N heterodimer acts in concert with TRIM5 to generate 'Lys-63'-linked polyubiquitin chains which activate the MAP3K7/TAK1 complex which in turn results in the induction and expression of NF-kappa-B and MAPK-responsive inflammatory genes (By similarity).<ref>PMID:10089880</ref> <ref>PMID:14562038</ref> <ref>PMID:19269966</ref> <ref>PMID:20061386</ref> <ref>PMID:21512573</ref> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
+ | [[Category: Atcc 33152]] | ||
+ | [[Category: E2 ubiquitin-conjugating enzyme]] | ||
+ | [[Category: Human]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Guan H]] | + | [[Category: Guan, H]] |
- | [[Category: Ouyang S]] | + | [[Category: Ouyang, S]] |
+ | [[Category: Legionella pneumophila virulence factors complex]] | ||
+ | [[Category: Transferase]] |
Revision as of 05:59, 20 May 2020
Crystal structure of MavC-UBE2N-Ub
|