6u7c

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==Human GRK2 in complex with Gbetagamma subunits and CCG258747==
==Human GRK2 in complex with Gbetagamma subunits and CCG258747==
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<StructureSection load='6u7c' size='340' side='right'caption='[[6u7c]]' scene=''>
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<StructureSection load='6u7c' size='340' side='right'caption='[[6u7c]], [[Resolution|resolution]] 2.44&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6U7C OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6U7C FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6u7c]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Bovin Bovin] and [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6U7C OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6U7C FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6u7c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6u7c OCA], [http://pdbe.org/6u7c PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6u7c RCSB], [http://www.ebi.ac.uk/pdbsum/6u7c PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6u7c ProSAT]</span></td></tr>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=Q1Y:5-[(3S,4R)-3-{[(2H-1,3-benzodioxol-5-yl)oxy]methyl}piperidin-4-yl]-2-fluoro-N-[(2H-indazol-3-yl)methyl]benzamide'>Q1Y</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GRK2, ADRBK1, BARK, BARK1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), GNB1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9913 BOVIN]), GNG2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9913 BOVIN])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/[Beta-adrenergic-receptor]_kinase [Beta-adrenergic-receptor] kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.11.15 2.7.11.15] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6u7c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6u7c OCA], [http://pdbe.org/6u7c PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6u7c RCSB], [http://www.ebi.ac.uk/pdbsum/6u7c PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6u7c ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[[http://www.uniprot.org/uniprot/ARBK1_HUMAN ARBK1_HUMAN]] Specifically phosphorylates the agonist-occupied form of the beta-adrenergic and closely related receptors, probably inducing a desensitization of them. Key regulator of LPAR1 signaling. Competes with RALA for binding to LPAR1 thus affecting the signaling properties of the receptor. Desensitizes LPAR1 and LPAR2 in a phosphorylation-independent manner.<ref>PMID:19306925</ref> [[http://www.uniprot.org/uniprot/GBG2_BOVIN GBG2_BOVIN]] Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. [[http://www.uniprot.org/uniprot/GBB1_BOVIN GBB1_BOVIN]] Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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G protein-coupled receptor (GPCR) kinases (GRKs) play a key role in terminating signals initiated by agonist-bound GPCRs. However, chronic stimulation of GPCRs, such as that which occurs in heart failure, leads to the over-expression of GRKs and maladaptive down regulation of GPCRs on the cell surface. We previously reported the discovery of potent and selective families of GRK inhibitors based on either the paroxetine or GSK180736A scaffold. A new inhibitor, CCG258747, based on paroxetine, demonstrates increased potency against the GRK2 subfamily and favorable pharmacokinetic parameters in mice. CCG258747 and the closely related compound CCG258208 also showed high selectivity for the GRK2 subfamily in a kinome panel of 104 kinases. We developed a cell-based assay to screen the ability of CCG258747 and ten other inhibitors with different GRK subfamily selectivities and with either the paroxetine or GSK180736A scaffold to block internalization of the micro-opioid receptor (MOR). CCG258747 showed the best efficacy in blocking MOR internalization among the compounds tested. Further we show that compounds based on paroxetine had much better cell permeability than those based on GSK180736A, explaining why GSK180736A-based inhibitors, although being potent in vitro, do not always show efficacy in cell-based assays. This study validates the paroxetine scaffold as the most effective for GRK inhibition in living cells, confirms that GRK2 predominantly drives internalization of MOR in the cell-lines we tested, and underscores the utility of high-resolution cell-based assays for assessment of compound efficacy. SIGNIFICANCE STATEMENT: G protein-coupled receptor kinases are attractive targets for developing therapeutics for heart failure because cardiac-selective knockouts of GRK2 and GRK5 in mice have shown improved heart function following injury. We have synthesized a new GRK2-subfamily selective inhibitor, CCG258747, that has nanomolar potency against GRK2 and excellent selectivity over other kinases. A live-cell receptor internalization assay was developed to test the ability of this and other GRK2 inhibitors to impart efficacy on a GRK-dependent process in cells. Our data indicates that CCG258747 blocked the internalization of the mu-opioid receptor most efficaciously because it has the best ability to cross cell membranes. This assay will aid in selecting inhibitors to pursue in future mouse studies.
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A New Paroxetine-Based GRK2 Inhibitor Reduces Internalization of the mu-Opioid Receptor.,Bouley RA, Weinberg ZY, Waldschmidt HV, Yen YC, Larsen SD, Puthenveedu MA, Tesmer JJG Mol Pharmacol. 2020 Mar 31. pii: mol.119.118661. doi: 10.1124/mol.119.118661. PMID:32234810<ref>PMID:32234810</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 6u7c" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Bovin]]
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[[Category: Human]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Bouley R]]
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[[Category: Bouley, R]]
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[[Category: Tesmer JJG]]
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[[Category: Tesmer, J J.G]]
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[[Category: G-protein coupled receptor kinase]]
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[[Category: Kinase inhibitor]]
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[[Category: Signaling protein]]
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[[Category: Transferase-signaling protein complex]]

Revision as of 06:09, 20 May 2020

Human GRK2 in complex with Gbetagamma subunits and CCG258747

PDB ID 6u7c

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