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Aldolase 3D structures

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Line 6: Line 6:
*Fructose–1,6-bisphosphate aldolase
*Fructose–1,6-bisphosphate aldolase
 +
**[[1xfb]], [[1qo5]], [[2ald]], [[1ald]], [[5ky6]] – hFBPA – human<br />
 +
**[[1xdl]], [[1xdm]] – hFBPA (mutant)<br />
 +
**[[1zah]], [[1fdj]], [[1ewd]], [[1ewe]], [[1ex5]], [[1ado]], [[5vy5]] - rFBPA – rabbit<br />
 +
**[[3dfn]], [[3dfp]], [[3dfq]], [[3dft]], [[2bv4]], [[3b8d]], [[3bv4]], [[5f4x]] – rFBPA (mutant)<br />
 +
**[[1fba]] – FBPA – ''Drosophila melanogaster''<br />
**[[1ojx]], [[1ok6]] – TptFBPA – ''Thermoproteus tenax''<br />
**[[1ojx]], [[1ok6]] – TptFBPA – ''Thermoproteus tenax''<br />
**[[3qrh]] – EncFBPA – ''Encephalitozoon cuniculi''<br />
**[[3qrh]] – EncFBPA – ''Encephalitozoon cuniculi''<br />
Line 11: Line 16:
**[[3q94]] – BaFBPA – ''Bacullus anthracis''<br />
**[[3q94]] – BaFBPA – ''Bacullus anthracis''<br />
**[[3c4u]] – HpFBPA – ''Helicobacter pylori''<br />
**[[3c4u]] – HpFBPA – ''Helicobacter pylori''<br />
-
**[[1zah]], [[1fdj]], [[1ewd]], [[1ewe]], [[1ex5]], [[1ado]], [[5vy5]] - rFBPA – rabbit<br />
 
-
**[[3dfn]], [[3dfp]], [[3dfq]], [[3dft]], [[2bv4]], [[3b8d]], [[3bv4]], [[5f4x]] – rFBPA (mutant)<br />
 
**[[3kx6]] – FBPA – ''Babesia bovis''<br />
**[[3kx6]] – FBPA – ''Babesia bovis''<br />
**[[3gak]] – GiFBPA – ''Giardia intestinalis''<br />
**[[3gak]] – GiFBPA – ''Giardia intestinalis''<br />
Line 20: Line 23:
**[[2iqt]] – FBPA – ''Porphyromonas gingivalis''<br />
**[[2iqt]] – FBPA – ''Porphyromonas gingivalis''<br />
**[[2fjk]] – FBPA – ''Thermus caldophilus''<br />
**[[2fjk]] – FBPA – ''Thermus caldophilus''<br />
-
**[[1xfb]], [[1qo5]], [[2ald]], [[1ald]], [[5ky6]] – hFBPA – human<br />
 
-
**[[1xdl]], [[1xdm]] – hFBPA (mutant)<br />
 
**[[1l6w]] – EcFBPA I - ''Escherichia coli''<br />
**[[1l6w]] – EcFBPA I - ''Escherichia coli''<br />
**[[1gyn]], [[1dos]], [[1zen]], [[5gk3]], [[5gk4]], [[5gk5]], [[5gk6]], [[5gk7]], [[5gk8]] – EcFBPA II <br />
**[[1gyn]], [[1dos]], [[1zen]], [[5gk3]], [[5gk4]], [[5gk5]], [[5gk6]], [[5gk7]], [[5gk8]] – EcFBPA II <br />
**[[1f2j]] – FBPA – ''Trypanosoma brucei''<br />
**[[1f2j]] – FBPA – ''Trypanosoma brucei''<br />
**[[5o0w]] - FBPA – ''Trypanosoma congolense''<br />
**[[5o0w]] - FBPA – ''Trypanosoma congolense''<br />
-
**[[1fba]] – FBPA – ''Drosophila melanogaster''<br />
 
**[[3t2b]] – TnFBPA – ''Thermoproteus neutrophilus''<br />
**[[3t2b]] – TnFBPA – ''Thermoproteus neutrophilus''<br />
**[[4moz]] – FBPA – ''Slackia heliotrinireducens''<br />
**[[4moz]] – FBPA – ''Slackia heliotrinireducens''<br />
Line 34: Line 34:
*FBPA complex
*FBPA complex
-
**[[2yce]], [[1ok4]] – TptFBPA + reaction intermediate<br />
+
**[[4ald]] – hFBPA + FBP<br />
-
**[[1w8s]] – TptFBPA + FBP<br />
+
-
**[[3mbd]] – EncFBPA + phosphate<br />
+
-
**[[3mbf]] - EncFBPA + FBP<br />
+
-
**[[3n9r]], [[3n9s]], [[3c52]], [[3c56]] - HpFBPA + inhibitor<br />
+
-
**[[3mmt]] – FBPA + FBP – ''Bartonella henselae''<br />
+
**[[1zai]] - rFBPA + FBP<br />
**[[1zai]] - rFBPA + FBP<br />
**[[6ald]] - rFBPA (mutant) + FBP<br />
**[[6ald]] - rFBPA (mutant) + FBP<br />
Line 60: Line 55:
**[[2eph]], [[2pc4]] – PfFBPA + BPTRAP C-terminal<br />
**[[2eph]], [[2pc4]] – PfFBPA + BPTRAP C-terminal<br />
**[[4tr9]] – PfFBPA + BPTRAP C-terminal + inhibitor<br />
**[[4tr9]] – PfFBPA + BPTRAP C-terminal + inhibitor<br />
-
**[[4ald]] – hFBPA + FBP<br />
 
**[[1rv8]], [[1rvg]] – FBPA + metal – ''Thermus aquaticus''<br />
**[[1rv8]], [[1rvg]] – FBPA + metal – ''Thermus aquaticus''<br />
**[[1b57]] – EcFBPA + oxamate<br />
**[[1b57]] – EcFBPA + oxamate<br />
Line 71: Line 65:
**[[5tkn]], [[5tkp]] – TgFBPA + P6F <br />
**[[5tkn]], [[5tkp]] – TgFBPA + P6F <br />
**[[5tkl]] – TgFBPA + P6F + DHAP <br />
**[[5tkl]] – TgFBPA + P6F + DHAP <br />
 +
**[[2yce]], [[1ok4]] – TptFBPA + reaction intermediate<br />
 +
**[[1w8s]] – TptFBPA + FBP<br />
 +
**[[3mbd]] – EncFBPA + phosphate<br />
 +
**[[3mbf]] - EncFBPA + FBP<br />
 +
**[[3n9r]], [[3n9s]], [[3c52]], [[3c56]] - HpFBPA + inhibitor<br />
 +
**[[3mmt]] – FBPA + FBP – ''Bartonella henselae''<br />
*Fructose–6-phosphate aldolase
*Fructose–6-phosphate aldolase
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*Dehydroneopterin aldolase
*Dehydroneopterin aldolase
 +
**[[1sql]] – DHNPA + guanine – ''Arabidopsis thaliana''<br />
**[[3r2e]] – DHNPA – ''Yersinia pestis''<br />
**[[3r2e]] – DHNPA – ''Yersinia pestis''<br />
-
**[[2cg8]] – SpDHNPA <br />
+
**[[2cg8]] – SpDHNPA – ''Streptpcoccus pneumoniae''<br />
**[[2o90]] – EcDHNPA + neopterin<br />
**[[2o90]] – EcDHNPA + neopterin<br />
**[[2nm2]], [[2nm3]], [[1u68]], [[2dhn]] - SaDHNPA + neopterin<br />
**[[2nm2]], [[2nm3]], [[1u68]], [[2dhn]] - SaDHNPA + neopterin<br />
Line 106: Line 107:
**[[1rri]], [[1rrw]], [[1rry]], [[1rs2]], [[1rs4]], [[1rsd]], [[1rsi]], [[1dhn]] - SaDHNPA + inhibitor<br />
**[[1rri]], [[1rrw]], [[1rry]], [[1rs2]], [[1rs4]], [[1rsd]], [[1rsi]], [[1dhn]] - SaDHNPA + inhibitor<br />
**[[1z9w]] – MtDHNPA<br />
**[[1z9w]] – MtDHNPA<br />
-
**[[1sql]] – DHNPA + guanine – ''Arabidopsis thaliana''<br />
 
**[[3v9o]] - DHNPA + guanine – ''Burkholderia thailandensis''<br />
**[[3v9o]] - DHNPA + guanine – ''Burkholderia thailandensis''<br />
**[[5far]] – BcDHNPA + methylguanine – ''Bacillus cereus''<br />
**[[5far]] – BcDHNPA + methylguanine – ''Bacillus cereus''<br />
Line 216: Line 216:
*Tagatose–1,6-bisphosphate aldolase
*Tagatose–1,6-bisphosphate aldolase
-
**[[3myo]], [[3myp]], [[3mhf]], [[3jrk]] – SpTBPA – ''Streptococcus pyogenes''<br />
+
**[[3myo]], [[3myp]], [[3mhf]], [[3jrk]] – SpyTBPA – ''Streptococcus pyogenes''<br />
-
**[[5f2i]] – SpDERA2 (mutant) <br />
+
**[[5f2i]] – SpyDERA2 (mutant) <br />
-
**[[5ff7]] – SpDERA + glycerol-3-phosphate + glyceraldehyde-3-phosphate<br />
+
**[[5ff7]] – SpyDERA + glycerol-3-phosphate + glyceraldehyde-3-phosphate<br />
-
**[[5f4w]] – SpDERA2 + phosphonotagatose <br />
+
**[[5f4w]] – SpyDERA2 + phosphonotagatose <br />
-
**[[5f4s]] – SpDERA2 + phosphonofructose <br />
+
**[[5f4s]] – SpyDERA2 + phosphonofructose <br />
-
**[[5f2g]] – SpDERA2 (mutant) + phosphonofructose <br />
+
**[[5f2g]] – SpyDERA2 (mutant) + phosphonofructose <br />
-
**[[5f2m]], [[5f2l]] – SpDERA2 + inhibitor<br />
+
**[[5f2m]], [[5f2l]] – SpyDERA2 + inhibitor<br />
 +
**[[3mhg]] - SpyTBPA + reaction intermediate<br />
**[[3iv3]] - TBPA – ''Streptococcus mutans''<br />
**[[3iv3]] - TBPA – ''Streptococcus mutans''<br />
-
**[[3mhg]] - SpTBPA + reaction intermediate<br />
 
**[[3kao]] – SaTBPA – ''Staphylococcus aureus''<br />
**[[3kao]] – SaTBPA – ''Staphylococcus aureus''<br />
**[[1gvf]] - EcTBPA<br />
**[[1gvf]] - EcTBPA<br />
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**[[1e46]], [[1e47]], [[1e48]], [[1e49]], [[1e4a]], [[1e4b]], [[1e4c]], [[1dzu]], [[1dzw]], [[1dzx]], [[1dzy]], [[1dzz]], [[1dzv]] – EcFPA (mutant)<br />
**[[1e46]], [[1e47]], [[1e48]], [[1e49]], [[1e4a]], [[1e4b]], [[1e4c]], [[1dzu]], [[1dzw]], [[1dzx]], [[1dzy]], [[1dzz]], [[1dzv]] – EcFPA (mutant)<br />
**[[4fua]] – EcFPA + oxamate<br />
**[[4fua]] – EcFPA + oxamate<br />
-
**[[4c24]] ,[[4c25]] – SpFPA - ''Streptococcus pneumoniae''<br />
+
**[[4c24]] ,[[4c25]] – SpFPA <br />
**[[4xxf]] – FPA – ''Glaciozyma antarctica''<br />
**[[4xxf]] – FPA – ''Glaciozyma antarctica''<br />
**[[6btd]] – BtFPA – ''Bacillus thuringiensis''<br />
**[[6btd]] – BtFPA – ''Bacillus thuringiensis''<br />
Line 252: Line 252:
*Oxoglutarate aldolase
*Oxoglutarate aldolase
 +
**[[3s5n]], [[3s5o]] - hOGA<br />
**[[3m6y]] – BcOGA <br />
**[[3m6y]] – BcOGA <br />
**[[1wau]], [[1wbh]] – EcOGA (mutant)<br />
**[[1wau]], [[1wbh]] – EcOGA (mutant)<br />
-
**[[3s5n]], [[3s5o]] - hOGA
 
*LsrF aldolase
*LsrF aldolase

Revision as of 08:48, 2 June 2020

3D structures of Aldolase

Updated on 02-June-2020

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel

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