6v2j
From Proteopedia
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==Crystal structure of ClC-ec1 triple mutant (E113Q, E148Q, E203Q)== | ==Crystal structure of ClC-ec1 triple mutant (E113Q, E148Q, E203Q)== | ||
| - | <StructureSection load='6v2j' size='340' side='right'caption='[[6v2j]]' scene=''> | + | <StructureSection load='6v2j' size='340' side='right'caption='[[6v2j]], [[Resolution|resolution]] 2.62Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6V2J OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6V2J FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6v2j]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6V2J OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6V2J FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6v2j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6v2j OCA], [http://pdbe.org/6v2j PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6v2j RCSB], [http://www.ebi.ac.uk/pdbsum/6v2j PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6v2j ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr> |
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">clcA, eriC, yadQ, b0155, JW5012 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6v2j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6v2j OCA], [http://pdbe.org/6v2j PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6v2j RCSB], [http://www.ebi.ac.uk/pdbsum/6v2j PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6v2j ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [[http://www.uniprot.org/uniprot/CLCA_ECOLI CLCA_ECOLI]] Proton-coupled chloride transporter. Functions as antiport system and exchanges two chloride ions for 1 proton. Probably acts as an electrical shunt for an outwardly-directed proton pump that is linked to amino acid decarboxylation, as part of the extreme acid resistance (XAR) response.<ref>PMID:12384697</ref> <ref>PMID:14985752</ref> <ref>PMID:16341087</ref> <ref>PMID:16905147</ref> <ref>PMID:18678918</ref> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Among coupled exchangers, CLCs uniquely catalyze the exchange of oppositely charged ions (Cl(-) for H(+)). Transport-cycle models to describe and explain this unusual mechanism have been proposed based on known CLC structures. While the proposed models harmonize with many experimental findings, gaps and inconsistencies in our understanding have remained. One limitation has been that global conformational change - which occurs in all conventional transporter mechanisms - has not been observed in any high-resolution structure. Here, we describe the 2.6 A structure of a CLC mutant designed to mimic the fully H(+)-loaded transporter. This structure reveals a global conformational change to improve accessibility for the Cl(-) substrate from the extracellular side and new conformations for two key glutamate residues. Together with DEER measurements, MD simulations, and functional studies, this new structure `provides evidence for a unified model of H(+) /Cl(-) transport that reconciles existing data on all CLC-type proteins. | ||
| + | |||
| + | A CLC-ec1 mutant reveals global conformational change and suggests a unifying mechanism for the Cl(-)/H(+) transport cycle.,Chavan TS, Cheng RC, Jiang T, Mathews II, Stein RA, Koehl A, Mchaourab HS, Tajkhorshid E, Maduke M Elife. 2020 Apr 20;9. pii: 53479. doi: 10.7554/eLife.53479. PMID:32310757<ref>PMID:32310757</ref> | ||
| + | |||
| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 6v2j" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Ecoli]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Chavan | + | [[Category: Chavan, T S]] |
| - | [[Category: Maduke M]] | + | [[Category: Maduke, M]] |
| - | [[Category: Mathews | + | [[Category: Mathews, I I]] |
| + | [[Category: Chloride transporter]] | ||
| + | [[Category: Clc-ec1]] | ||
| + | [[Category: Transport protein]] | ||
Revision as of 06:46, 10 June 2020
Crystal structure of ClC-ec1 triple mutant (E113Q, E148Q, E203Q)
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