1bit

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:1bit.gif|left|200px]]
[[Image:1bit.gif|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 1bit |SIZE=350|CAPTION= <scene name='initialview01'>1bit</scene>, resolution 1.83&Aring;
+
The line below this paragraph, containing "STRUCTURE_1bit", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=BEN:BENZAMIDINE'>BEN</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY=
+
or leave the SCENE parameter empty for the default display.
-
|GENE=
+
-->
-
|DOMAIN=
+
{{STRUCTURE_1bit| PDB=1bit | SCENE= }}
-
|RELATEDENTRY=
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1bit FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bit OCA], [http://www.ebi.ac.uk/pdbsum/1bit PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1bit RCSB]</span>
+
-
}}
+
'''THE CRYSTAL STRUCTURE OF ANIONIC SALMON TRYPSIN IN A SECOND CRYSTAL FORM'''
'''THE CRYSTAL STRUCTURE OF ANIONIC SALMON TRYPSIN IN A SECOND CRYSTAL FORM'''
Line 19: Line 16:
==About this Structure==
==About this Structure==
-
1BIT is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/ ]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BIT OCA].
+
1BIT is a [[Single protein]] structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BIT OCA].
==Reference==
==Reference==
Line 25: Line 22:
[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Berglund, G I.]]
[[Category: Berglund, G I.]]
-
[[Category: serine proteinase]]
+
[[Category: Serine proteinase]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 11:34:07 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 19:01:50 2008''
+

Revision as of 08:34, 2 May 2008

Template:STRUCTURE 1bit

THE CRYSTAL STRUCTURE OF ANIONIC SALMON TRYPSIN IN A SECOND CRYSTAL FORM


Overview

Anionic salmon trypsin in a second crystal form (ST-IIB) has been refined at 1.83 A, resolution. The crystals are orthorhombic and belong to space group P2(1)2(1)2 with lattice parameters a = 77.09, b = 82.33 and c = 31.16 A. The present structure has been compared to salmon trypsin as it appears in a previously reported crystal form (ST-IIA) with cell dimensions a = 61.95, b = 84.33 and c = 39.11 A [Smalas & Hordvik (1993). Acta Cryst. D49, 318-330]. The presence of a sulfate group involved in several hydrogen bonds to active-site residues, and the location of an additional benzamidine site in the crystal lattice, are the most striking differences between the present and the previous structure. Superposition of main-chain atoms in the two structures give an overall r.m.s. difference of 0.26 A, with the main differences located to areas with different molecular packing. The overall coordinate error is estimated to be between 0.20 and 0.25 A, by the method of Luzzati.

About this Structure

1BIT is a Single protein structure. Full crystallographic information is available from OCA.

Reference

Structure of anionic salmon trypsin in a second crystal form., Berglund GI, Smalas AO, Hordvik A, Willassen NP, Acta Crystallogr D Biol Crystallogr. 1995 Sep 1;51(Pt 5):725-30. PMID:15299802 Page seeded by OCA on Fri May 2 11:34:07 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools