6l8s

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==High resolution crystal structure of crustacean hemocyanin.==
==High resolution crystal structure of crustacean hemocyanin.==
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<StructureSection load='6l8s' size='340' side='right'caption='[[6l8s]]' scene=''>
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<StructureSection load='6l8s' size='340' side='right'caption='[[6l8s]], [[Resolution|resolution]] 1.58&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6L8S OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6L8S FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6l8s]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Panulirus_japonicus Panulirus japonicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6L8S OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6L8S FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6l8s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6l8s OCA], [http://pdbe.org/6l8s PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6l8s RCSB], [http://www.ebi.ac.uk/pdbsum/6l8s PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6l8s ProSAT]</span></td></tr>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=O:OXYGEN+ATOM'>O</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6l8s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6l8s OCA], [http://pdbe.org/6l8s PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6l8s RCSB], [http://www.ebi.ac.uk/pdbsum/6l8s PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6l8s ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Hemocyanin (Hc) and phenoloxidase (PO) are the members of type 3 copper protein family. Although arthropod Hc and PO exhibit similar three-dimensional structures of the copper-containing active site, Hc functions as an oxygen transport protein, showing minimal or no phenoloxidase activity. Here, we present the crystal structure of the oxy form of Hc from Panulirus japonicus (PjHc) at 1.58A resolution. The structure of the di-copper active site of PjHc was found to be almost identical to that of PO. Although conserved amino acids and the water molecule crucial for the enzymatic activity were observed in PjHc at almost the same positions as those in PO, PjHc showed no enzymatic activity under our experimental conditions. One striking difference between PjHc and arthropod PO was the presence of a "blocker residue" near the binuclear copper site of PjHc. This blocker residue comprised a phenylalanine residue tightly stacked with an imidazole ring of a CuA coordinated histidine and hindered substrates from accessing the active site. Our results suggest that the blocker residue is also a determining factor of the catalytic activity of type 3 copper proteins.
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The high-resolution crystal structure of lobster hemocyanin shows its enzymatic capability as a phenoloxidase.,Masuda T, Baba S, Matsuo K, Ito S, Mikami B Arch Biochem Biophys. 2020 May 4:108370. doi: 10.1016/j.abb.2020.108370. PMID:32380017<ref>PMID:32380017</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 6l8s" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Baba S]]
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[[Category: Panulirus japonicus]]
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[[Category: Masuda T]]
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[[Category: Baba, S]]
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[[Category: Mikami B]]
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[[Category: Masuda, T]]
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[[Category: Mikami, B]]
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[[Category: Arthropod]]
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[[Category: Copper protein]]
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[[Category: Crustacean]]
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[[Category: Hemocyanin]]
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[[Category: Oxygen transport]]
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[[Category: Phenoloxidase]]

Revision as of 10:33, 17 June 2020

High resolution crystal structure of crustacean hemocyanin.

PDB ID 6l8s

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