User:Isabela Fonseca de Oliveira Granha/Sandbox 1
From Proteopedia
(Difference between revisions)
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==Structure== | ==Structure== | ||
- | The <scene name='84/848919/Betacateninacoloridaartigo/2'>zebrafish ß-catenin</scene> ([http://www.rcsb.org/structure/2Z6G]) contains residues 126-681 and a central core of <scene name='84/848919/Armrepeatsdomain/1'>12 armadillo repeats domain</scene> and an alpha helix, the <scene name='84/848919/C-helix3correta/1'>helix-C</scene>, at the beginning of the ß-catenin C-terminal domain. The armadillo domain is made of three helices in each repeat and has a particular site which is positively charged, constituting the <scene name='84/848919/Armbidingsurface/1'>binding surface</scene> for the majority of ß-catenin ligands. <ref name="xing2009" /> | + | The <scene name='84/848919/Betacateninacoloridaartigo/2'>zebrafish ß-catenin</scene> ([http://www.rcsb.org/structure/2Z6G 2Z6G]) contains residues 126-681 and a central core of <scene name='84/848919/Armrepeatsdomain/1'>12 armadillo repeats domain</scene> and an alpha helix, the <scene name='84/848919/C-helix3correta/1'>helix-C</scene>, at the beginning of the ß-catenin C-terminal domain. The armadillo domain is made of three helices in each repeat and has a particular site which is positively charged, constituting the <scene name='84/848919/Armbidingsurface/1'>binding surface</scene> for the majority of ß-catenin ligands. <ref name="xing2009" /> |
The terminal domains sequences are less conserved than the armadillo repeat domain, mediate some of the protein interactions and are both negatively charged. It is observed that the <scene name='84/848919/C-helix3correta/1'>helix-C constitutes the C-terminal domain</scene>, and the N terminus of the first armadillo repeat has an <scene name='84/848919/Correton-terminushelix/1'>extra alpha helix</scene>. Both N- and C-terminal domains do not interact with the armadillo repeat domain. <ref name="xing2009" /> | The terminal domains sequences are less conserved than the armadillo repeat domain, mediate some of the protein interactions and are both negatively charged. It is observed that the <scene name='84/848919/C-helix3correta/1'>helix-C constitutes the C-terminal domain</scene>, and the N terminus of the first armadillo repeat has an <scene name='84/848919/Correton-terminushelix/1'>extra alpha helix</scene>. Both N- and C-terminal domains do not interact with the armadillo repeat domain. <ref name="xing2009" /> | ||
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In the absence of Wnt stimulus, the ß-catenin is located at the cytoplasmic side of the membrane as a component of cadherin-based cell-cell connections. [[Cadherin|Cadherins]] are transmembrane glycoproteins calcium-dependent adhesion that can link to ß-catenin through their cytoplasmic tails. The cadherin-catenin complex forms adherens junctions that polarize epithelial tissues and hold the cells together. <ref>Developmental Biology . Eleventh Edition. By Scott F. Gilbert and Michael J. F. Barresi. Sunderland (Massachusetts): Sinauer Associates. ISBN: 978-1-60535-470-5. 2016. </ref> | In the absence of Wnt stimulus, the ß-catenin is located at the cytoplasmic side of the membrane as a component of cadherin-based cell-cell connections. [[Cadherin|Cadherins]] are transmembrane glycoproteins calcium-dependent adhesion that can link to ß-catenin through their cytoplasmic tails. The cadherin-catenin complex forms adherens junctions that polarize epithelial tissues and hold the cells together. <ref>Developmental Biology . Eleventh Edition. By Scott F. Gilbert and Michael J. F. Barresi. Sunderland (Massachusetts): Sinauer Associates. ISBN: 978-1-60535-470-5. 2016. </ref> | ||
- | The most known interaction occurs between <scene name='84/848919/Correctbeta-catenin_e-cadherin/2'>ß-catenin (green) and E-cadherin (pink)</scene> ([http://www.rcsb.org/structure/1I7X]) (epithelial cadherin). They are associated while still in the endoplasmic reticulum and interfering with the binding of these proteins results in proteasomal degradation of the [[cadherin]]. First, alpha-catenin binds to ß-catenin at the first ARM repeat, amino acids <scene name='84/848919/Corretoam118-149/1'>118-149</scene>, resulting in an alpha-catenin/ß-catenin heterodimer. This binding stabilizes ß-catenin in the hinged form, and E-cadherin can connect simultaneously. The <scene name='84/848919/Surfacebeta-catenin_e-cadherin/1'>interaction surface</scene> is extensive, covering the entire length of the ß-catenin ARM repeat domain and involving the C-terminal 100 residues of the cadherin cytoplasmic domain. <ref name="valenta2012">DOI 10.1038/emboj.2012.150</ref> <ref name="huber2001">Huber, A. H., & Weis, W. I. (2001). The structure of the β-catenin/E-cadherin complex and the molecular basis of diverse ligand recognition by β-catenin. Cell, 105(3), 391-402.</ref> | + | The most known interaction occurs between <scene name='84/848919/Correctbeta-catenin_e-cadherin/2'>ß-catenin (green) and E-cadherin (pink)</scene> ([http://www.rcsb.org/structure/1I7X 1I7X]) (epithelial cadherin). They are associated while still in the endoplasmic reticulum and interfering with the binding of these proteins results in proteasomal degradation of the [[cadherin]]. First, alpha-catenin binds to ß-catenin at the first ARM repeat, amino acids <scene name='84/848919/Corretoam118-149/1'>118-149</scene>, resulting in an alpha-catenin/ß-catenin heterodimer. This binding stabilizes ß-catenin in the hinged form, and E-cadherin can connect simultaneously. The <scene name='84/848919/Surfacebeta-catenin_e-cadherin/1'>interaction surface</scene> is extensive, covering the entire length of the ß-catenin ARM repeat domain and involving the C-terminal 100 residues of the cadherin cytoplasmic domain. <ref name="valenta2012">DOI 10.1038/emboj.2012.150</ref> <ref name="huber2001">Huber, A. H., & Weis, W. I. (2001). The structure of the β-catenin/E-cadherin complex and the molecular basis of diverse ligand recognition by β-catenin. Cell, 105(3), 391-402.</ref> |
==The ß-catenin destruction complex== | ==The ß-catenin destruction complex== | ||
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The inhibition of ß-catenin destruction leads to increased levels of the protein in cytoplasm and its translocation into the nucleus. ß-catenin interacts with different nuclear pore complex components and ARM repeats <scene name='84/848919/R10-12/1'>R10-R12</scene> are crucial for its import and export. [[Forkhead box protein|FoxM1]] also facilitates its nuclear translocation directly interacting with ARM repeats <scene name='84/848919/R11-12/2'>R11-R12</scene>. [[Forkhead box protein|FoxM1]] forms a complex with ß-catenin/TCF on the promoters of Wnt target genes. Once in the nucleus, ß-catenin and its DNA binding partners can activate transcription of Wnt/ß-catenin target genes. Therefore, ß-catenin can only initiates transcription in a multimeric complex, as its central transcriptional activator. <ref name="valenta2012" /> | The inhibition of ß-catenin destruction leads to increased levels of the protein in cytoplasm and its translocation into the nucleus. ß-catenin interacts with different nuclear pore complex components and ARM repeats <scene name='84/848919/R10-12/1'>R10-R12</scene> are crucial for its import and export. [[Forkhead box protein|FoxM1]] also facilitates its nuclear translocation directly interacting with ARM repeats <scene name='84/848919/R11-12/2'>R11-R12</scene>. [[Forkhead box protein|FoxM1]] forms a complex with ß-catenin/TCF on the promoters of Wnt target genes. Once in the nucleus, ß-catenin and its DNA binding partners can activate transcription of Wnt/ß-catenin target genes. Therefore, ß-catenin can only initiates transcription in a multimeric complex, as its central transcriptional activator. <ref name="valenta2012" /> | ||
- | TCF transcription factors serve as the main nuclear member of ß-catenin multimeric complex. TCFs bind to DNA enhancers and ß-catenin acts as a link in a chain between them and others transcriptional coactivators. This interaction can be modulated to enhance, repress os switch off ß-catenin-mediated transcription. The majority of these transcription coactivators binds to <scene name='84/848919/R12andhelix-c/1'>the last ARM repeat and interacts with Helix-C</scene> and many of them can affect chromatin structure. Indeed, it seems that the C-terminus region of ß-catenin coordinates the recruitment and sequential exchange of these proteins. Binding of ß-catenin to TCF is blocked by some proteins such as <scene name='84/848919/Icat_bcat/3'>ICAT (orange), which interacts with the central ARM repeat of ß-catenin (green).</scene> ([http://www.rcsb.org/structure/1M1E]) <ref name="valenta2012" /> | + | TCF transcription factors serve as the main nuclear member of ß-catenin multimeric complex. TCFs bind to DNA enhancers and ß-catenin acts as a link in a chain between them and others transcriptional coactivators. This interaction can be modulated to enhance, repress os switch off ß-catenin-mediated transcription. The majority of these transcription coactivators binds to <scene name='84/848919/R12andhelix-c/1'>the last ARM repeat and interacts with Helix-C</scene> and many of them can affect chromatin structure. Indeed, it seems that the C-terminus region of ß-catenin coordinates the recruitment and sequential exchange of these proteins. Binding of ß-catenin to TCF is blocked by some proteins such as <scene name='84/848919/Icat_bcat/3'>ICAT (orange), which interacts with the central ARM repeat of ß-catenin (green).</scene> ([http://www.rcsb.org/structure/1M1E 1M1E]) <ref name="valenta2012" /> |
== References == | == References == | ||
<references/> | <references/> |
Revision as of 19:50, 20 June 2020
ß-catenin
ß-catenin is an important element in cell adherens junctions connecting cytoplasmic proteins. Besides that, it is an essential regulator of the canonical Wnt pathway (related to embryonic development). Disturbance of this activity is associated with cancer and other diseases. Therefore, ß-catenin is an important target for developing medication for many diseases, with considerable interest in its structure. [1]
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