This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1bkv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:1bkv.gif|left|200px]]
[[Image:1bkv.gif|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 1bkv |SIZE=350|CAPTION= <scene name='initialview01'>1bkv</scene>, resolution 2.00&Aring;
+
The line below this paragraph, containing "STRUCTURE_1bkv", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=HYP:4-HYDROXYPROLINE'>HYP</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY=
+
or leave the SCENE parameter empty for the default display.
-
|GENE=
+
-->
-
|DOMAIN=
+
{{STRUCTURE_1bkv| PDB=1bkv | SCENE= }}
-
|RELATEDENTRY=
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1bkv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bkv OCA], [http://www.ebi.ac.uk/pdbsum/1bkv PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1bkv RCSB]</span>
+
-
}}
+
'''COLLAGEN'''
'''COLLAGEN'''
Line 19: Line 16:
==About this Structure==
==About this Structure==
-
1BKV is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/ ]. The following page contains interesting information on the relation of 1BKV with [[http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/pdb4_1.html Collagen]]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BKV OCA].
+
The following page contains interesting information on the relation of 1BKV with [[http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/pdb4_1.html Collagen]]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BKV OCA].
==Reference==
==Reference==
Sequence dependent conformational variations of collagen triple-helical structure., Kramer RZ, Bella J, Mayville P, Brodsky B, Berman HM, Nat Struct Biol. 1999 May;6(5):454-7. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10331873 10331873]
Sequence dependent conformational variations of collagen triple-helical structure., Kramer RZ, Bella J, Mayville P, Brodsky B, Berman HM, Nat Struct Biol. 1999 May;6(5):454-7. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10331873 10331873]
[[Category: Collagen]]
[[Category: Collagen]]
-
[[Category: Protein complex]]
 
[[Category: Bella, J.]]
[[Category: Bella, J.]]
[[Category: Berman, H M.]]
[[Category: Berman, H M.]]
Line 30: Line 26:
[[Category: Kramer, R Z.]]
[[Category: Kramer, R Z.]]
[[Category: Mayville, P.]]
[[Category: Mayville, P.]]
-
[[Category: collagen]]
+
[[Category: Collagen]]
-
[[Category: hydrogen bonding]]
+
[[Category: Hydrogen bonding]]
-
[[Category: hydroxyproline]]
+
[[Category: Hydroxyproline]]
-
[[Category: triple helix]]
+
[[Category: Triple helix]]
-
[[Category: type iii collagen]]
+
[[Category: Type iii collagen]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 11:38:45 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 19:03:04 2008''
+

Revision as of 08:38, 2 May 2008

Template:STRUCTURE 1bkv

COLLAGEN


Overview

The 2 A crystal structure reported here of the collagen-like model peptide, T3-785, provides the first visualization of how the sequence of collagen defines distinctive local conformational variations in triple-helical structure.

About this Structure

The following page contains interesting information on the relation of 1BKV with [Collagen]. Full crystallographic information is available from OCA.

Reference

Sequence dependent conformational variations of collagen triple-helical structure., Kramer RZ, Bella J, Mayville P, Brodsky B, Berman HM, Nat Struct Biol. 1999 May;6(5):454-7. PMID:10331873 Page seeded by OCA on Fri May 2 11:38:45 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools