6wpu

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==Structure of S-allyl-L-cysteine S-oxygenase from Allium sativum==
==Structure of S-allyl-L-cysteine S-oxygenase from Allium sativum==
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<StructureSection load='6wpu' size='340' side='right'caption='[[6wpu]]' scene=''>
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<StructureSection load='6wpu' size='340' side='right'caption='[[6wpu]], [[Resolution|resolution]] 2.08&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6WPU OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6WPU FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6wpu]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Allsa Allsa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6WPU OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6WPU FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6wpu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6wpu OCA], [http://pdbe.org/6wpu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6wpu RCSB], [http://www.ebi.ac.uk/pdbsum/6wpu PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6wpu ProSAT]</span></td></tr>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AsFMO1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4682 ALLSA])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6wpu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6wpu OCA], [http://pdbe.org/6wpu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6wpu RCSB], [http://www.ebi.ac.uk/pdbsum/6wpu PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6wpu ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Allicin is a component of the characteristic smell and flavor of garlic (Allium sativum). A flavin-containing monooxygenase (FMO) produced by A. sativum (AsFMO) was previously proposed to oxidize S-allyl-L-cysteine (SAC) to alliin, an allicin precursor. Here, we present a kinetic and structural characterization of AsFMO that suggests a possible contradiction to this proposal. Results of steady-state kinetic analyses revealed that AsFMO exhibits negligible activity with SAC; however, the enzyme was highly active with L-cysteine, N-acetyl-L-cysteine, and allyl mercaptan. We found that allyl mercaptan with NADPH is the preferred substrate-cofactor combination. Rapid-reaction kinetic analyses showed that NADPH binds tightly (KD ~2 muM) to AsFMO and that the hydride transfer occurs with pro-R stereospecificity. We detected formation of a long-wavelength band when AsFMO was reduced by NADPH, probably representing the formation of a charge transfer complex. In the absence of substrate, the reduced enzyme, in complex with NADP+, reacted with oxygen and formed an intermediate with a spectrum characteristic of C4a-hydroperoxyflavin, which decays several orders of magnitude slower than the kcat. The presence of substrate enhanced C4a-hydroperoxyflavin formation, and upon hydroxylation, oxidation occurred at a rate constant similar to the kcat. The structure of AsFMO complexed with FAD at 2.08 A resolution features two domains for binding of FAD and NADPH, representative of class B flavin monooxygenases. These biochemical and structural results are consistent with AsFMO being an S-monooxygenase involved in allicin biosynthesis by direct formation of sulfenic acid, and not by SAC oxidation.
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Structure and function of a flavin-dependent S-monooxygenase from garlic (Allium sativum).,Valentino H, Campbell AC, Schuermann JP, Sultana N, Nam HG, LeBlanc S, Tanner JJ, Sobrado P J Biol Chem. 2020 Jun 11. pii: RA120.014484. doi: 10.1074/jbc.RA120.014484. PMID:32527723<ref>PMID:32527723</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 6wpu" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Allsa]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Campbell AC]]
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[[Category: Campbell, A C]]
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[[Category: Schuermann JP]]
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[[Category: Schuermann, J P]]
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[[Category: Tanner JJ]]
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[[Category: Tanner, J J]]
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[[Category: Flavin-containing monooxygenase]]
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[[Category: Flavoprotein]]
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[[Category: Oxidoreductase]]

Revision as of 07:14, 25 June 2020

Structure of S-allyl-L-cysteine S-oxygenase from Allium sativum

PDB ID 6wpu

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