This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2vrj
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==Beta-glucosidase from Thermotoga maritima in complex with N-octyl-5- deoxy-6-oxa-N-(thio)carbamoylcalystegine== | ==Beta-glucosidase from Thermotoga maritima in complex with N-octyl-5- deoxy-6-oxa-N-(thio)carbamoylcalystegine== | ||
| - | <StructureSection load='2vrj' size='340' side='right' caption='[[2vrj]], [[Resolution|resolution]] 1.90Å' scene=''> | + | <StructureSection load='2vrj' size='340' side='right'caption='[[2vrj]], [[Resolution|resolution]] 1.90Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2vrj]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43589 Atcc 43589]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VRJ OCA]. For a <b>guided tour on the structure components</b> use [http:// | + | <table><tr><td colspan='2'>[[2vrj]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43589 Atcc 43589]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VRJ OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2VRJ FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NCW:(1S,2R,3S,4R,5R)-2,3,4-TRIHYDROXY-N-OCTYL-6-OXA-8-AZABICYCLO[3.2.1]OCTANE-8-CARBOTHIOAMIDE'>NCW</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NCW:(1S,2R,3S,4R,5R)-2,3,4-TRIHYDROXY-N-OCTYL-6-OXA-8-AZABICYCLO[3.2.1]OCTANE-8-CARBOTHIOAMIDE'>NCW</scene></td></tr> |
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2j78|2j78]], [[1w3j|1w3j]], [[2j75|2j75]], [[2j7g|2j7g]], [[2jal|2jal]], [[2j7e|2j7e]], [[2j7h|2j7h]], [[2cbu|2cbu]], [[1oin|1oin]], [[2j7c|2j7c]], [[2j7b|2j7b]], [[2cet|2cet]], [[1oif|1oif]], [[2j79|2j79]], [[1uz1|1uz1]], [[1od0|1od0]], [[2ces|2ces]], [[2j7d|2j7d]], [[2j7f|2j7f]], [[1oim|1oim]], [[2j77|2j77]], [[2cbv|2cbv]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2j78|2j78]], [[1w3j|1w3j]], [[2j75|2j75]], [[2j7g|2j7g]], [[2jal|2jal]], [[2j7e|2j7e]], [[2j7h|2j7h]], [[2cbu|2cbu]], [[1oin|1oin]], [[2j7c|2j7c]], [[2j7b|2j7b]], [[2cet|2cet]], [[1oif|1oif]], [[2j79|2j79]], [[1uz1|1uz1]], [[1od0|1od0]], [[2ces|2ces]], [[2j7d|2j7d]], [[2j7f|2j7f]], [[1oim|1oim]], [[2j77|2j77]], [[2cbv|2cbv]]</td></tr> | ||
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-glucosidase Beta-glucosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.21 3.2.1.21] </span></td></tr> | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-glucosidase Beta-glucosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.21 3.2.1.21] </span></td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http:// | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2vrj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vrj OCA], [http://pdbe.org/2vrj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2vrj RCSB], [http://www.ebi.ac.uk/pdbsum/2vrj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2vrj ProSAT]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
| Line 22: | Line 22: | ||
==See Also== | ==See Also== | ||
*[[Beta-glucosidase|Beta-glucosidase]] | *[[Beta-glucosidase|Beta-glucosidase]] | ||
| + | *[[Beta-glucosidase 3D structures|Beta-glucosidase 3D structures]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Atcc 43589]] | [[Category: Atcc 43589]] | ||
[[Category: Beta-glucosidase]] | [[Category: Beta-glucosidase]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Aguilar, M]] | [[Category: Aguilar, M]] | ||
[[Category: Casas, J]] | [[Category: Casas, J]] | ||
Revision as of 08:26, 25 June 2020
Beta-glucosidase from Thermotoga maritima in complex with N-octyl-5- deoxy-6-oxa-N-(thio)carbamoylcalystegine
| |||||||||||
Categories: Atcc 43589 | Beta-glucosidase | Large Structures | Aguilar, M | Casas, J | Davies, G J | Egido-Gabas, M | Fernandez, J M.Garcia | Garcia-Moreno, M I | Gloster, T M | Llebaria, A | Mellet, C Ortiz | Calystegine | Carbohydrate metabolism | Cellulose degradation | Family 1 | Glycosidase | Glycoside hydrolase | Hydrolase | Inhibitor | Polysaccharide degradation
