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Chitinase 3D structures
From Proteopedia
(Difference between revisions)
| Line 8: | Line 8: | ||
**[[5hbf]] – hChi - human<br /> | **[[5hbf]] – hChi - human<br /> | ||
**[[4wjx]], [[4wka]] – hChi catalytic domain<br /> | **[[4wjx]], [[4wka]] – hChi catalytic domain<br /> | ||
| + | **[[6so0]] – hChi - NMR <br /> | ||
**[[4tx7]] – Chi – yard-long bean<br /> | **[[4tx7]] – Chi – yard-long bean<br /> | ||
**[[3iwr]], [[2dkv]] – Chi residues 33-340 – Japanese rice<br /> | **[[3iwr]], [[2dkv]] – Chi residues 33-340 – Japanese rice<br /> | ||
| Line 19: | Line 20: | ||
**[[3n11]] – BcChi – ''Bacillus cereus''<br /> | **[[3n11]] – BcChi – ''Bacillus cereus''<br /> | ||
**[[3g6l]] - BoChi residues 21-426 – ''Bionectria ochroleuca''<br /> | **[[3g6l]] - BoChi residues 21-426 – ''Bionectria ochroleuca''<br /> | ||
| - | **[[3oa5]], [[4dws]], [[4a5q]] – | + | **[[3oa5]], [[4dws]], [[4a5q]] – YeChi – ''Yersinia entomophaga''<br /> |
**[[4mpi]] – HbChi chitin-binding domain – ''Hevea brasiliensis''<br /> | **[[4mpi]] – HbChi chitin-binding domain – ''Hevea brasiliensis''<br /> | ||
**[[4mst]] – HbChi catalytic domain <br /> | **[[4mst]] – HbChi catalytic domain <br /> | ||
| Line 26: | Line 27: | ||
**[[1waw]], [[1wb0]], [[4wk9]], [[4wkf]], [[4wkh]] – hChi catalytic domain + polypeptide – human<br /> | **[[1waw]], [[1wb0]], [[4wk9]], [[4wkf]], [[4wkh]] – hChi catalytic domain + polypeptide – human<br /> | ||
| - | **[[1hkk]], [[1hkm]], [[3rm4]], [[3rm8]], [[3rm9]], [[3rme]], [[5nrf]], [[5nra]], [[5nr8]] – hChi catalytic domain + inhibitor<br /> | + | **[[1hkk]], [[1hkm]], [[3rm4]], [[3rm8]], [[3rm9]], [[3rme]], [[5nrf]], [[5nra]], [[5nr8]], [[6jjr]], [[6jk6]] – hChi catalytic domain + inhibitor<br /> |
**[[3wl1]], [[3wqv]], [[3wqw]] – cbChi + GlcNAC - corn borer<br /> | **[[3wl1]], [[3wqv]], [[3wqw]] – cbChi + GlcNAC - corn borer<br /> | ||
**[[3wl0]] – cbChi (mutant) + GlcNAC<br /> | **[[3wl0]] – cbChi (mutant) + GlcNAC<br /> | ||
| Line 45: | Line 46: | ||
**[[5y29]] – cbChi catalytic domain 1 residues 1606-1992 <br /> | **[[5y29]] – cbChi catalytic domain 1 residues 1606-1992 <br /> | ||
**[[5y2a]] – cbChi catalytic domain 2 residues 2056-2438<br /> | **[[5y2a]] – cbChi catalytic domain 2 residues 2056-2438<br /> | ||
| + | **[[6jav]], [[6jaw]], [[6jax]], [[6jay]] – cbChi catalytic domain 1 + inhibitor <br /> | ||
**[[1dxj]] – Chi – Jack bean<br /> | **[[1dxj]] – Chi – Jack bean<br /> | ||
**[[1e15]], [[3wd0]] - SmChi<br /> | **[[1e15]], [[3wd0]] - SmChi<br /> | ||
| Line 60: | Line 62: | ||
**[[2a3a]], [[2a3b]], [[2a3c]], [[2a3e]] – AfChi + inhibitor<br /> | **[[2a3a]], [[2a3b]], [[2a3c]], [[2a3e]] – AfChi + inhibitor<br /> | ||
**[[1w1p]], [[1w1t]], [[1w1v]], [[1w1y]], [[1o6i]], [[1h0g]], [[1h0i]] – SmChi + polypeptide<br /> | **[[1w1p]], [[1w1t]], [[1w1v]], [[1w1y]], [[1o6i]], [[1h0g]], [[1h0i]] – SmChi + polypeptide<br /> | ||
| + | **[[6ogd]] – YeChi + toxin subunits yena1+yena2 – Cryo EM<br /> | ||
*Chitinase III | *Chitinase III | ||
| Line 111: | Line 114: | ||
**[[5df0]] – ApChiA + NAG + chitotriothiazoline<br /> | **[[5df0]] – ApChiA + NAG + chitotriothiazoline<br /> | ||
**[[1edq]], [[1ctn]], [[5zl9]], [[5z7o]], [[5z7n]], [[5z7m]] - SmChiA – ''Serratia marcescens''<br /> | **[[1edq]], [[1ctn]], [[5zl9]], [[5z7o]], [[5z7n]], [[5z7m]] - SmChiA – ''Serratia marcescens''<br /> | ||
| - | **[[1x6l]], [[1rd6]] – SmChiA (mutant)<br /> | + | **[[1x6l]], [[1rd6]], [[5z7p]] – SmChiA (mutant)<br /> |
**[[1x6n]] - SmChi (mutant) + inhibitor<br /> | **[[1x6n]] - SmChi (mutant) + inhibitor<br /> | ||
**[[1ffq]], [[2wk2]], [[2wly]], [[2wlz]], [[2wm0]] - SmChi + inhibitor<br /> | **[[1ffq]], [[2wk2]], [[2wly]], [[2wlz]], [[2wm0]] - SmChi + inhibitor<br /> | ||
| Line 122: | Line 125: | ||
*Chitinase B | *Chitinase B | ||
| - | **[[4z2g]], [[4z2h]], [[4z2i]], [[4z2j]], [[4z2k]], [[4z2l]] – SmChiB + inhibitor<br /> | + | **[[4z2g]], [[4z2h]], [[4z2i]], [[4z2j]], [[4z2k]], [[4z2l]], [[6jk9]], [[6jkf]], [[7c34]] – SmChiB + inhibitor<br /> |
*Chitinase C | *Chitinase C | ||
| Line 133: | Line 136: | ||
* Chitinase H | * Chitinase H | ||
| - | **[[3w4r]], [[5gpr]] – cbChiH | + | **[[3w4r]], [[5gpr]] – cbChiH<br /> |
**[[3wkz]] – cbChiH (mutant)<br /> | **[[3wkz]] – cbChiH (mutant)<br /> | ||
**[[5gqb]] – cbChiH + chitohepatose<br /> | **[[5gqb]] – cbChiH + chitohepatose<br /> | ||
| + | **[[6jmn]] – cbChiH + inhibitor<br /> | ||
*Other chitinases | *Other chitinases | ||
| Line 146: | Line 150: | ||
**[[1cns]] – Chi – barley<br /> | **[[1cns]] – Chi – barley<br /> | ||
**[[3w3e]] – Chi – cowpea<br /> | **[[3w3e]] – Chi – cowpea<br /> | ||
| + | **[[6kpl]] – cfChi – caterpillar fungus<br /> | ||
**[[2uy2]] – yChi residues 22-315 – yeast<br /> | **[[2uy2]] – yChi residues 22-315 – yeast<br /> | ||
**[[1wno]], [[1w9p]] - AfChi<br /> | **[[1wno]], [[1w9p]] - AfChi<br /> | ||
| Line 181: | Line 186: | ||
**[[3fy1]], [[2ybt]], [[2ybu]] - hChi catalytic domain + inhibitor<br /> | **[[3fy1]], [[2ybt]], [[2ybu]] - hChi catalytic domain + inhibitor<br /> | ||
**[[1hki]], [[1hkj]] - hChi + inhibitor<br /> | **[[1hki]], [[1hkj]] - hChi + inhibitor<br /> | ||
| + | **[[6kpm]] – cfChi + fucose<br /> | ||
| + | **[[6kpn]], [[6kpo]] – cfChi (mutant) + fucosyl-acetylglucosamine<br /> | ||
**[[2uy3]], [[2uy4]], [[2uy5]] - yChi residues 22-315 + inhibitor<br /> | **[[2uy3]], [[2uy4]], [[2uy5]] - yChi residues 22-315 + inhibitor<br /> | ||
**[[2z38]] - BjChi catalytic domain + Cl<br /> | **[[2z38]] - BjChi catalytic domain + Cl<br /> | ||
Revision as of 10:10, 5 July 2020
3D Structures of Chitinase
Updated on 05-July-2020
