1c3l

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:1c3l.gif|left|200px]]
[[Image:1c3l.gif|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 1c3l |SIZE=350|CAPTION= <scene name='initialview01'>1c3l</scene>, resolution 2.16&Aring;
+
The line below this paragraph, containing "STRUCTURE_1c3l", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=XE:XENON'>XE</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Subtilisin Subtilisin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.62 3.4.21.62] </span>
+
or leave the SCENE parameter empty for the default display.
-
|GENE=
+
-->
-
|DOMAIN=
+
{{STRUCTURE_1c3l| PDB=1c3l | SCENE= }}
-
|RELATEDENTRY=[[1sbc|1SBC]], [[1bfu|1BFU]], [[1bfk|1BFK]], [[1sca|1SCA]], [[1av7|1AV7]], [[1avt|1AVT]]
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1c3l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1c3l OCA], [http://www.ebi.ac.uk/pdbsum/1c3l PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1c3l RCSB]</span>
+
-
}}
+
'''SUBTILISIN-CARLSBERG COMPLEXED WITH XENON (8 BAR)'''
'''SUBTILISIN-CARLSBERG COMPLEXED WITH XENON (8 BAR)'''
Line 30: Line 27:
[[Category: Prange, T.]]
[[Category: Prange, T.]]
[[Category: Schiltz, M.]]
[[Category: Schiltz, M.]]
-
[[Category: h, N Colloc.]]
+
[[Category: H, N Colloc.]]
-
[[Category: serine-proteinase]]
+
[[Category: Serine-proteinase]]
-
[[Category: xenon]]
+
[[Category: Xenon]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 12:17:11 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 19:13:49 2008''
+

Revision as of 09:17, 2 May 2008

Image:1c3l.gif

Template:STRUCTURE 1c3l

SUBTILISIN-CARLSBERG COMPLEXED WITH XENON (8 BAR)


Overview

X-ray diffraction is used to study the binding of xenon and krypton to a variety of crystallised proteins: porcine pancreatic elastase; subtilisin Carlsberg from Bacillus licheniformis; cutinase from Fusarium solani; collagenase from Hypoderma lineatum; hen egg lysozyme, the lipoamide dehydrogenase domain from the outer membrane protein P64k from Neisseria meningitidis; urate-oxidase from Aspergillus flavus, mosquitocidal delta-endotoxin CytB from Bacillus thuringiensis and the ligand-binding domain of the human nuclear retinoid-X receptor RXR-alpha. Under gas pressures ranging from 8 to 20 bar, xenon is able to bind to discrete sites in hydrophobic cavities, ligand and substrate binding pockets, and into the pore of channel-like structures. These xenon complexes can be used to map hydrophobic sites in proteins, or as heavy-atom derivatives in the isomorphous replacement method of structure determination.

About this Structure

1C3L is a Single protein structure of sequence from Bacillus licheniformis. Full crystallographic information is available from OCA.

Reference

Exploring hydrophobic sites in proteins with xenon or krypton., Prange T, Schiltz M, Pernot L, Colloc'h N, Longhi S, Bourguet W, Fourme R, Proteins. 1998 Jan;30(1):61-73. PMID:9443341 Page seeded by OCA on Fri May 2 12:17:11 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1c3l"
Personal tools