6iuk
From Proteopedia
(Difference between revisions)
Line 3: | Line 3: | ||
<SX load='6iuk' size='340' side='right' viewer='molstar' caption='[[6iuk]], [[Resolution|resolution]] 3.50Å' scene=''> | <SX load='6iuk' size='340' side='right' viewer='molstar' caption='[[6iuk]], [[Resolution|resolution]] 3.50Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[6iuk]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6IUK OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6IUK FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6iuk]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Murine_norovirus_gv/nih-2410/2005/usa Murine norovirus gv/nih-2410/2005/usa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6IUK OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6IUK FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6iuk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6iuk OCA], [http://pdbe.org/6iuk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6iuk RCSB], [http://www.ebi.ac.uk/pdbsum/6iuk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6iuk ProSAT]</span></td></tr> | + | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VP1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1028322 Murine norovirus GV/NIH-2410/2005/USA])</td></tr> |
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6iuk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6iuk OCA], [http://pdbe.org/6iuk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6iuk RCSB], [http://www.ebi.ac.uk/pdbsum/6iuk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6iuk ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Norovirus is the major cause of epidemic nonbacterial gastroenteritis worldwide. Lack of structural information on infection and replication mechanisms hampers the development of effective vaccines and remedies. Here, using cryo-electron microscopy, we show that the capsid structure of murine noroviruses changes in response to aqueous conditions. By twisting the flexible hinge connecting two domains, the protruding (P) domain reversibly rises off the shell (S) domain in solutions of higher pH, but rests on the S domain in solutions of lower pH. Metal ions help to stabilize the resting conformation in this process. Furthermore, in the resting conformation, the cellular receptor CD300lf is readily accessible, and thus infection efficiency is significantly enhanced. Two similar P domain conformations were also found simultaneously in the human norovirus GII.3 capsid, although the mechanism of the conformational change is not yet clear. These results provide new insights into the mechanisms of non-enveloped norovirus transmission that invades host cells, replicates, and sometimes escapes the hosts immune system, through dramatic environmental changes in the gastrointestinal tract. | ||
+ | |||
+ | Dynamic rotation of the protruding domain enhances the infectivity of norovirus.,Song C, Takai-Todaka R, Miki M, Haga K, Fujimoto A, Ishiyama R, Oikawa K, Yokoyama M, Miyazaki N, Iwasaki K, Murakami K, Katayama K, Murata K PLoS Pathog. 2020 Jul 2;16(7):e1008619. doi: 10.1371/journal.ppat.1008619., eCollection 2020 Jul. PMID:32614892<ref>PMID:32614892</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 6iuk" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</SX> | </SX> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
+ | [[Category: Murine norovirus gv/nih-2410/2005/usa]] | ||
[[Category: Iwasaki, K]] | [[Category: Iwasaki, K]] | ||
[[Category: Katayama, K]] | [[Category: Katayama, K]] |
Revision as of 11:18, 22 July 2020
Cryo-EM structure of Murine Norovirus capsid
|