6vm5
From Proteopedia
(Difference between revisions)
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==Structure of Moraxella osloensis Cap4 SAVED/CARF-domain containing receptor== | ==Structure of Moraxella osloensis Cap4 SAVED/CARF-domain containing receptor== | ||
| - | <StructureSection load='6vm5' size='340' side='right'caption='[[6vm5]]' scene=''> | + | <StructureSection load='6vm5' size='340' side='right'caption='[[6vm5]], [[Resolution|resolution]] 2.35Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6VM5 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6VM5 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6vm5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_19976 Atcc 19976]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6VM5 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6VM5 FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6vm5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6vm5 OCA], [http://pdbe.org/6vm5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6vm5 RCSB], [http://www.ebi.ac.uk/pdbsum/6vm5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6vm5 ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> |
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">FEF33_11620, MOTT16_09860 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=34062 ATCC 19976])</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6vm5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6vm5 OCA], [http://pdbe.org/6vm5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6vm5 RCSB], [http://www.ebi.ac.uk/pdbsum/6vm5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6vm5 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | cGAS/DncV-like nucleotidyltransferase (CD-NTase) enzymes are immune sensors that synthesize nucleotide second messengers and initiate antiviral responses in bacterial and animal cells. Here, we discover Enterobacter cloacae CD-NTase-associated protein 4 (Cap4) as a founding member of a diverse family of >2,000 bacterial receptors that respond to CD-NTase signals. Structures of Cap4 reveal a promiscuous DNA endonuclease domain activated through ligand-induced oligomerization. Oligonucleotide recognition occurs through an appended SAVED domain that is an unexpected fusion of two CRISPR-associated Rossman fold (CARF) subunits co-opted from type III CRISPR immunity. Like a lock and key, SAVED effectors exquisitely discriminate 2'-5'- and 3'-5'-linked bacterial cyclic oligonucleotide signals and enable specific recognition of at least 180 potential nucleotide second messenger species. Our results reveal SAVED CARF family proteins as major nucleotide second messenger receptors in CBASS and CRISPR immune defense and extend the importance of linkage specificity beyond mammalian cGAS-STING signaling. | ||
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| + | CBASS Immunity Uses CARF-Related Effectors to Sense 3'-5'- and 2'-5'-Linked Cyclic Oligonucleotide Signals and Protect Bacteria from Phage Infection.,Lowey B, Whiteley AT, Keszei AFA, Morehouse BR, Mathews IT, Antine SP, Cabrera VJ, Kashin D, Niemann P, Jain M, Schwede F, Mekalanos JJ, Shao S, Lee ASY, Kranzusch PJ Cell. 2020 Jun 4. pii: S0092-8674(20)30614-0. doi: 10.1016/j.cell.2020.05.019. PMID:32544385<ref>PMID:32544385</ref> | ||
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| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 6vm5" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Atcc 19976]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Antine | + | [[Category: Antine, S P]] |
| - | [[Category: Cabrera V]] | + | [[Category: Cabrera, V]] |
| - | [[Category: Keszei | + | [[Category: Keszei, A F.A]] |
| - | [[Category: Kranzusch | + | [[Category: Kranzusch, P J]] |
| - | [[Category: Lee | + | [[Category: Lee, A S.Y]] |
| - | [[Category: Lowey B]] | + | [[Category: Lowey, B]] |
| - | [[Category: Mekalanos | + | [[Category: Mekalanos, J J]] |
| - | [[Category: Morehouse | + | [[Category: Morehouse, B R]] |
| - | [[Category: Schwede F]] | + | [[Category: Schwede, F]] |
| - | [[Category: Shao S]] | + | [[Category: Shao, S]] |
| - | [[Category: Whiteley | + | [[Category: Whiteley, A T]] |
| + | [[Category: Carf]] | ||
| + | [[Category: Duf4297]] | ||
| + | [[Category: Hydrolase]] | ||
| + | [[Category: Nuclease]] | ||
| + | [[Category: Phage immunity]] | ||
| + | [[Category: Saved]] | ||
Revision as of 11:40, 22 July 2020
Structure of Moraxella osloensis Cap4 SAVED/CARF-domain containing receptor
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Categories: Atcc 19976 | Large Structures | Antine, S P | Cabrera, V | Keszei, A F.A | Kranzusch, P J | Lee, A S.Y | Lowey, B | Mekalanos, J J | Morehouse, B R | Schwede, F | Shao, S | Whiteley, A T | Carf | Duf4297 | Hydrolase | Nuclease | Phage immunity | Saved
