6tsc
From Proteopedia
(Difference between revisions)
Line 1: | Line 1: | ||
==OphMA I407P complex with SAH== | ==OphMA I407P complex with SAH== | ||
- | <StructureSection load='6tsc' size='340' side='right'caption='[[6tsc]]' scene=''> | + | <StructureSection load='6tsc' size='340' side='right'caption='[[6tsc]], [[Resolution|resolution]] 2.19Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6TSC OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6TSC FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6tsc]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Jack_o'lantern Jack o'lantern]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6TSC OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6TSC FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6tsc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6tsc OCA], [http://pdbe.org/6tsc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6tsc RCSB], [http://www.ebi.ac.uk/pdbsum/6tsc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6tsc ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr> |
+ | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MVA:N-METHYLVALINE'>MVA</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6tsc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6tsc OCA], [http://pdbe.org/6tsc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6tsc RCSB], [http://www.ebi.ac.uk/pdbsum/6tsc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6tsc ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | The methylation of amide nitrogen atoms can improve the stability, oral availability, and cell permeability of peptide therapeutics. Chemical N-methylation of peptides is challenging. Omphalotin A is a ribosomally synthesized, macrocylic dodecapeptide with nine backbone N-methylations. The fungal natural product is derived from the precursor protein, OphMA, harboring both the core peptide and a SAM-dependent peptide alpha-N-methyltransferase domain. OphMA forms a homodimer and its alpha-N-methyltransferase domain installs the methyl groups in trans on the hydrophobic core dodecapeptide and some additional C-terminal residues of the protomers. These post-translational backbone N-methylations occur in a processive manner from the N- to the C-terminus of the peptide substrate. We demonstrate that OphMA can methylate polar, aromatic, and charged residues when these are introduced into the core peptide. Some of these amino acids alter the efficiency and pattern of methylation. Proline, depending on its sequence context, can act as a tunable stop signal. Crystal structures of OphMA variants have allowed rationalization of these observations. Our results hint at the potential to control this fungal alpha-N-methyltransferase for biotechnological applications. | ||
+ | |||
+ | Substrate Plasticity of a Fungal Peptide alpha-N-Methyltransferase.,Song H, Fahrig-Kamarauskaite JR, Matabaro E, Kaspar H, Shirran SL, Zach C, Pace A, Stefanov BA, Naismith JH, Kunzler M ACS Chem Biol. 2020 Jun 19. doi: 10.1021/acschembio.0c00237. PMID:32491837<ref>PMID:32491837</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 6tsc" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
+ | [[Category: Jack o'lantern]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Naismith | + | [[Category: Naismith, J H]] |
- | [[Category: Song H]] | + | [[Category: Song, H]] |
+ | [[Category: Peptide bond n-methyltransferase]] | ||
+ | [[Category: Transferase]] |
Revision as of 11:35, 29 July 2020
OphMA I407P complex with SAH
|