1cb2

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[[Image:1cb2.gif|left|200px]]
[[Image:1cb2.gif|left|200px]]
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{{Structure
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<!--
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|PDB= 1cb2 |SIZE=350|CAPTION= <scene name='initialview01'>1cb2</scene>, resolution 2.0&Aring;
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The line below this paragraph, containing "STRUCTURE_1cb2", creates the "Structure Box" on the page.
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|SITE= <scene name='pdbsite=ST1:Catalytic+Site+Including+Mutated+TYR-&#62;+PHE'>ST1</scene> and <scene name='pdbsite=ST2:Catalytic+Site+Including+Mutated+TYR-&#62;+PHE'>ST2</scene>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Cellulose_1,4-beta-cellobiosidase Cellulose 1,4-beta-cellobiosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.91 3.2.1.91] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE= CBH2 (Y169F) ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=51453 Hypocrea jecorina])
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-->
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|DOMAIN=
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{{STRUCTURE_1cb2| PDB=1cb2 | SCENE= }}
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|RELATEDENTRY=
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1cb2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1cb2 OCA], [http://www.ebi.ac.uk/pdbsum/1cb2 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1cb2 RCSB]</span>
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}}
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'''CELLOBIOHYDROLASE II, CATALYTIC DOMAIN, MUTANT Y169F'''
'''CELLOBIOHYDROLASE II, CATALYTIC DOMAIN, MUTANT Y169F'''
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[[Category: Kleywegt, G J.]]
[[Category: Kleywegt, G J.]]
[[Category: Szardenings, M.]]
[[Category: Szardenings, M.]]
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[[Category: glycoprotein]]
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[[Category: Glycoprotein]]
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[[Category: glycosidase]]
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[[Category: Glycosidase]]
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[[Category: hydrolase (o-glycosyl)]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 12:32:21 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 19:18:15 2008''
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Revision as of 09:32, 2 May 2008

Template:STRUCTURE 1cb2

CELLOBIOHYDROLASE II, CATALYTIC DOMAIN, MUTANT Y169F


Overview

Trichoderma reesei cellobiohydrolase II (CBHII) is an exoglucanase cleaving primarily cellobiose units from the non-reducing end of cellulose chains. The beta-1,4 glycosidic bond is cleaved by acid catalysis with an aspartic acid, D221, as the likely proton donor, and another aspartate, D175, probably ensuring its protonation and stabilizing charged reaction intermediates. The catalytic base has not yet been identified experimentally. The refined crystal structure of CBHII also shows a tyrosine residue, Y169, located close enough to the scissile bond to be involved in catalysis. The role of this residue has been studied by introducing a mutation Y169F, and analysing the kinetic and binding behavior of the mutated CBHII. The crystal structure of the mutated enzyme was determined to 2.0 A resolution showing no changes when compared with the structure of native CBHII. However, the association constants of the mutant enzyme for cellobiose and cellotriose are increased threefold and for 4-methylumbelliferyl cellobioside over 50-fold. The catalytic constants towards cellotriose and cellotetraose are four times lower for the mutant. These data suggest that Y169, on interacting with a glucose ring entering the second subsite in a narrow tunnel, helps to distort the glucose ring into a more reactive conformation. In addition, a change in the pH activity profile was observed. This indicates that Y169 may have a second role in the catalysis, namely to affect the protonation state of the active site carboxylates, D175 and D221.

About this Structure

1CB2 is a Single protein structure of sequence from Hypocrea jecorina. Full crystallographic information is available from OCA.

Reference

The active site of Trichoderma reesei cellobiohydrolase II: the role of tyrosine 169., Koivula A, Reinikainen T, Ruohonen L, Valkeajarvi A, Claeyssens M, Teleman O, Kleywegt GJ, Szardenings M, Rouvinen J, Jones TA, Teeri TT, Protein Eng. 1996 Aug;9(8):691-9. PMID:8875646 Page seeded by OCA on Fri May 2 12:32:21 2008

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