6xpd
From Proteopedia
(Difference between revisions)
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==Cryo-EM structure of human ZnT8 double mutant - D110N and D224N, determined in outward-facing conformation== | ==Cryo-EM structure of human ZnT8 double mutant - D110N and D224N, determined in outward-facing conformation== | ||
| - | <StructureSection load='6xpd' size='340' side='right'caption='[[6xpd]]' scene=''> | + | <StructureSection load='6xpd' size='340' side='right'caption='[[6xpd]], [[Resolution|resolution]] 3.80Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6XPD OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6XPD FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6xpd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6XPD OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6XPD FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6xpd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6xpd OCA], [http://pdbe.org/6xpd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6xpd RCSB], [http://www.ebi.ac.uk/pdbsum/6xpd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6xpd ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> |
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SLC30A8, ZNT8 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6xpd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6xpd OCA], [http://pdbe.org/6xpd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6xpd RCSB], [http://www.ebi.ac.uk/pdbsum/6xpd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6xpd ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [[http://www.uniprot.org/uniprot/ZNT8_HUMAN ZNT8_HUMAN]] Facilitates the accumulation of zinc from the cytoplasm into intracellular vesicles, being a zinc-efflux transporter. May be a major component for providing zinc to insulin maturation and/or storage processes in insulin-secreting pancreatic beta-cells.<ref>PMID:16984975</ref> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | ZnT8 is a Zn(2+)/H(+) antiporter that belongs to SLC30 family and plays an essential role in regulating Zn(2+) accumulation in the insulin secretory granules of pancreatic beta cells. Dysfunction of ZnT8 is associated with both type 1 and 2 diabetes. However, the Zn(2+)/H(+) exchange mechanism of ZnT8 remains unclear due to the lack of high-resolution structures. Here, we report the cryo-EM structures of human ZnT8 (HsZnT8) in both outward- and inward-facing conformations. HsZnT8 forms a dimeric structure with four Zn(2+) binding sites within each subunit: a highly conserved primary site in transmembrane domain (TMD) housing the Zn(2+) substrate; an interfacial site between TMD and C-terminal domain (CTD) that modulates the Zn(2+) transport activity of HsZnT8; and two adjacent sites buried in the cytosolic domain and chelated by conserved residues from CTD and the His-Cys-His (HCH) motif from the N-terminal segment of the neighboring subunit. A comparison of the outward- and inward-facing structures reveals that the TMD of each HsZnT8 subunit undergoes a large structural rearrangement, allowing for alternating access to the primary Zn(2+) site during the transport cycle. Collectively, our studies provide the structural insights into the Zn(2+)/H(+) exchange mechanism of HsZnT8. | ||
| + | |||
| + | Cryo-EM structures of human ZnT8 in both outward- and inward-facing conformations.,Xue J, Xie T, Zeng W, Jiang Y, Bai XC Elife. 2020 Jul 29;9. pii: 58823. doi: 10.7554/eLife.58823. PMID:32723473<ref>PMID:32723473</ref> | ||
| + | |||
| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 6xpd" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Human]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Bai | + | [[Category: Bai, X C]] |
| - | [[Category: Jiang | + | [[Category: Jiang, Y X]] |
| - | [[Category: Xue J]] | + | [[Category: Xue, J]] |
| + | [[Category: Transport protein]] | ||
| + | [[Category: Zinc transporter]] | ||
| + | [[Category: Znt8]] | ||
Revision as of 10:07, 12 August 2020
Cryo-EM structure of human ZnT8 double mutant - D110N and D224N, determined in outward-facing conformation
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Categories: Human | Large Structures | Bai, X C | Jiang, Y X | Xue, J | Transport protein | Zinc transporter | Znt8
