This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5llx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Bacteriophytochrome activated diguanylyl cyclase from Idiomarina species A28L with GTP bound==
==Bacteriophytochrome activated diguanylyl cyclase from Idiomarina species A28L with GTP bound==
-
<StructureSection load='5llx' size='340' side='right' caption='[[5llx]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
+
<StructureSection load='5llx' size='340' side='right'caption='[[5llx]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5llx]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LLX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5LLX FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5llx]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Idiomarina_sp._a28l Idiomarina sp. a28l]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LLX OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5LLX FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=LBV:3-[2-[(Z)-[3-(2-CARBOXYETHYL)-5-[(Z)-(4-ETHENYL-3-METHYL-5-OXIDANYLIDENE-PYRROL-2-YLIDENE)METHYL]-4-METHYL-PYRROL-1-IUM-2-YLIDENE]METHYL]-5-[(Z)-[(3E)-3-ETHYLIDENE-4-METHYL-5-OXIDANYLIDENE-PYRROLIDIN-2-YLIDENE]METHYL]-4-METHYL-1H-PYRROL-3-YL]PROPANOIC+ACID'>LBV</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=LBV:3-[2-[(Z)-[3-(2-CARBOXYETHYL)-5-[(Z)-(4-ETHENYL-3-METHYL-5-OXIDANYLIDENE-PYRROL-2-YLIDENE)METHYL]-4-METHYL-PYRROL-1-IUM-2-YLIDENE]METHYL]-5-[(Z)-[(3E)-3-ETHYLIDENE-4-METHYL-5-OXIDANYLIDENE-PYRROLIDIN-2-YLIDENE]METHYL]-4-METHYL-1H-PYRROL-3-YL]PROPANOIC+ACID'>LBV</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">A28LD_0430 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1036674 Idiomarina sp. A28L])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Diguanylate_cyclase Diguanylate cyclase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.65 2.7.7.65] </span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Diguanylate_cyclase Diguanylate cyclase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.65 2.7.7.65] </span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5llx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5llx OCA], [http://pdbe.org/5llx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5llx RCSB], [http://www.ebi.ac.uk/pdbsum/5llx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5llx ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5llx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5llx OCA], [http://pdbe.org/5llx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5llx RCSB], [http://www.ebi.ac.uk/pdbsum/5llx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5llx ProSAT]</span></td></tr>
</table>
</table>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 17: Line 18:
</div>
</div>
<div class="pdbe-citations 5llx" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5llx" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Diguanylate cyclase|Diguanylate cyclase]]
== References ==
== References ==
<references/>
<references/>
Line 22: Line 26:
</StructureSection>
</StructureSection>
[[Category: Diguanylate cyclase]]
[[Category: Diguanylate cyclase]]
 +
[[Category: Idiomarina sp. a28l]]
 +
[[Category: Large Structures]]
[[Category: Gourinchas, G]]
[[Category: Gourinchas, G]]
[[Category: Winkler, A]]
[[Category: Winkler, A]]

Revision as of 10:42, 12 August 2020

Bacteriophytochrome activated diguanylyl cyclase from Idiomarina species A28L with GTP bound

PDB ID 5llx

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5llx"
Personal tools