Helicase 3D structures
From Proteopedia
(Difference between revisions)
| Line 32: | Line 32: | ||
**[[2is4]], [[2is6]] - EcHel II (mutant) + ADP + DNA<BR /> | **[[2is4]], [[2is6]] - EcHel II (mutant) + ADP + DNA<BR /> | ||
**[[4c2t]], [[4c2u]], [[4c30]] – DrHel II + DNA - ''Deinococcus radiodurans''<br /> | **[[4c2t]], [[4c2u]], [[4c30]] – DrHel II + DNA - ''Deinococcus radiodurans''<br /> | ||
| + | **[[6ppj]] – MsHel (mutant) – ''Mycobacterium smegmatis'' – Cryo EM<br /> | ||
| + | **[[6ppr]], [[6ppu]] – MsHel + DNA – Cryo EM<br /> | ||
*ATP-dependent helicase ATRX | *ATP-dependent helicase ATRX | ||
| Line 118: | Line 120: | ||
**[[2jgn]] – hDDX3X helicase domain residues 408-579<BR /> | **[[2jgn]] – hDDX3X helicase domain residues 408-579<BR /> | ||
**[[3ly5]] – hDDX18 dead domain<BR /> | **[[3ly5]] – hDDX18 dead domain<BR /> | ||
| + | **[[6l5l]], [[6l5o]] – hDDX21 residues 120-495 (mutant)<br /> | ||
| + | **[[6l5m]] – hDDX21 + AMP<br /> | ||
| + | **[[6l5n]] – hDDX21 + RNA<br /> | ||
**[[2rb4]] – hDDX25 helicase domain<BR /> | **[[2rb4]] – hDDX25 helicase domain<BR /> | ||
**[[2p6n]] – hDDX41 helicase domain (mutant) <BR /> | **[[2p6n]] – hDDX41 helicase domain (mutant) <BR /> | ||
| Line 143: | Line 148: | ||
**[[3fht]] – hDBP5 + AMPPNP + RNA<BR /> | **[[3fht]] – hDBP5 + AMPPNP + RNA<BR /> | ||
**[[6cz5]] - hDDX3X residues 132-607 + AMP<br /> | **[[6cz5]] - hDDX3X residues 132-607 + AMP<br /> | ||
| + | **[[6o5f]] - hDDX3X + RNA<br /> | ||
**[[6b4k]] – hDDX19B residues 54-479 + ANP<br /> | **[[6b4k]] – hDDX19B residues 54-479 + ANP<br /> | ||
**[[6b4j]], [[6b4i]] – hDDX19B residues 54-479 + GLE1 + Nup42 + ANP<br /> | **[[6b4j]], [[6b4i]] – hDDX19B residues 54-479 + GLE1 + Nup42 + ANP<br /> | ||
| Line 178: | Line 184: | ||
**[[2eqs]] – hDHX8 S1 domain residues 260-355<br /> | **[[2eqs]] – hDHX8 S1 domain residues 260-355<br /> | ||
**[[3i4u]] – hDHX8 residues 950-1183<br /> | **[[3i4u]] – hDHX8 residues 950-1183<br /> | ||
| + | **[[6hys]] – hDHX8 helicase domain residues 548-1220 + ATP<br /> | ||
| + | **[[6hyt]] – hDHX8 helicase domain + ADP<br /> | ||
| + | **[[6hyu]] – hDHX8 helicase domain + RNA<br /> | ||
**[[3llm]] – hDHX9<br /> | **[[3llm]] – hDHX9<br /> | ||
**[[5xdr]] – hDHX15 residues 110-795 (mutant)<br /> | **[[5xdr]] – hDHX15 residues 110-795 (mutant)<br /> | ||
| + | **[[6sh6]], [[6sh7]] – hDHX15 + Nfkb-repressing factor + ADP<br /> | ||
**[[2n16]] – hDHX36 G-quadruplex domain - NMR<br /> | **[[2n16]] – hDHX36 G-quadruplex domain - NMR<br /> | ||
**[[2rqa]] – hDHX58 C terminal – NMR<br /> | **[[2rqa]] – hDHX58 C terminal – NMR<br /> | ||
| Line 279: | Line 289: | ||
*Werner syndrome ATP-dependent DNA helicase | *Werner syndrome ATP-dependent DNA helicase | ||
| - | **[[2e1e]], [[2e1f]], [[2dgz]] – hWRN HRDC domain<BR /> | + | **[[2e1e]], [[2e1f]], [[2dgz]] – hWRN HRDC domain 1142-1242<BR /> |
| - | **[[2fbt]] - hWRN exonuclease domain<BR /> | + | **[[2fbt]] - hWRN exonuclease domain 38-236<BR /> |
**[[2fbv]], [[2fbx]], [[2fby]], [[2fc0]] - hWRN exonuclease domain + metal ion | **[[2fbv]], [[2fbx]], [[2fby]], [[2fc0]] - hWRN exonuclease domain + metal ion | ||
| - | **[[3aaf]] – hWRN C terminal + DNA<br /> | + | **[[3aaf]] – hWRN C terminal 949-1079 + DNA<br /> |
| - | **[[2e6l]], [[2e6m]]- mWRN exonuclease domain | + | **[[6yhr]] - hWRN 517-1094<br /> |
| + | **[[2e6l]], [[2e6m]] - mWRN exonuclease domain | ||
*ATP-dependent DNA helicase Q | *ATP-dependent DNA helicase Q | ||
| Line 369: | Line 380: | ||
**[[5dma]] – GsPcrA C-terminal tudor domain<br /> | **[[5dma]] – GsPcrA C-terminal tudor domain<br /> | ||
| - | *DnaB helicase | + | *DnaB helicase or replicative DNA helicase |
**[[3gxv]] – HpDnaB – ''Helicobacter pylori''<BR /> | **[[3gxv]] – HpDnaB – ''Helicobacter pylori''<BR /> | ||
| Line 385: | Line 396: | ||
**[[1jwe]] - EcDnaB N terminal - NMR<BR /> | **[[1jwe]] - EcDnaB N terminal - NMR<BR /> | ||
**[[2r6c]], [[2r6a]] – BsDnaB + DnaG helicase-binding domain<br /> | **[[2r6c]], [[2r6a]] – BsDnaB + DnaG helicase-binding domain<br /> | ||
| - | **[[6bs8]] – MsDnaB <br /> | + | **[[6bs8]], [[6own]] – MsDnaB 238-376<br /> |
| + | **[[6rix]], [[6riy]] – DnaB (mutant) – ''Mycobacterium chimaera''<br /> | ||
*DnaC helicase | *DnaC helicase | ||
| Line 406: | Line 418: | ||
**[[4w7s]] – yCa8<br /> | **[[4w7s]] – yCa8<br /> | ||
| - | *Helicase | + | *Helicase NSP |
**[[6jim]] – NSP2 + RNA – Chicungunya virus<br /> | **[[6jim]] – NSP2 + RNA – Chicungunya virus<br /> | ||
| - | **[[2hwk]] – NSP2 – Venzuelan equine encephalitis virus | + | **[[2hwk]] – NSP2 – Venzuelan equine encephalitis virus<br /> |
| + | **[[6jyt]] – NSP13 – Human SARS-COV virus<br /> | ||
*Helicase SEN1 | *Helicase SEN1 | ||
Revision as of 07:39, 16 August 2020
3D structures of helicase
Updated on 16-August-2020
