This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


Hemagglutinin 3D structures

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: ==3D structures of hemagglutinin== Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} {{#tree:id=OrganizedByTopic|openlevels=0| *Various hemagglutinin **[[3aj5...)
Line 18: Line 18:
**[[4fbv]] - MxHA + glucoside<br />
**[[4fbv]] - MxHA + glucoside<br />
**[[6d7y]] – HA + immune protein – ''Pseudomonas aeruginosa''<br />
**[[6d7y]] – HA + immune protein – ''Pseudomonas aeruginosa''<br />
 +
**[[1rwr]] – HA filamentous – ''Bordetella pertussis''<br />
 +
**[[6efc]] – SgHA 220-453 – ''Streptococcus gordonii''<br />
 +
**[[6efd]] – SgHA + trisaccharide<br />
*Influenza hemagglutinin (IvHA)
*Influenza hemagglutinin (IvHA)
Line 24: Line 27:
**[[2dci]], [[1xoo]], [[1xop]] - IvHA fusion domain (mutant) – NMR<br />
**[[2dci]], [[1xoo]], [[1xop]] - IvHA fusion domain (mutant) – NMR<br />
**[[6chx]] - IvHA head domain<br />
**[[6chx]] - IvHA head domain<br />
-
**[[2ibx]], [[1ti8]], [[2wr0]], [[2wr1]], [[2wr2]], [[2wr3]], [[2wr4]], [[2wr5]], [[2wr7]], [[2wrb]], [[2wrc]], [[2wrd]], [[2wre]], [[2wrf]], [[2wrg]], [[2wrh]], [[3uyw]], [[4wa1]], [[4we8]], [[4wea]], [[4wsr]], [[6d8w]], [[6osr]], [[6ona]], [[6n41]], [[6n08]], [[6mzk]], [[6mym]], [[6mya]], [[6mxu]], [[5ykc]] – IvHA<br />
+
**[[2ibx]], [[1ti8]], [[2wr0]], [[2wr1]], [[2wr2]], [[2wr3]], [[2wr4]], [[2wr5]], [[2wr7]], [[2wrb]], [[2wrc]], [[2wrd]], [[2wre]], [[2wrf]], [[2wrg]], [[2wrh]], [[3uyw]], [[4wa1]], [[4we8]], [[4wea]], [[4wsr]], [[6d8w]], [[6osr]], [[6ona]], [[6n41]], [[6n08]], [[6mzk]], [[6mym]], [[6mya]], [[6mxu]], [[5ykc]], [[6pcx]], [[6pd3]], [[6pd5]], [[6pd6]], [[6wxb]] – IvHA<br />
-
**[[5z88]], [[5yt9]], [[5yt8]] - IvHA (mutant)<br />
+
**[[5z88]], [[5yt9]], [[5yt8]], [[6idd]], [[6iig]], [[6ijt]], [[6in5]], [[6kcj]], [[6ntf]], [[6p6p]] - IvHA (mutant)<br />
**[[4we9]], [[4wss]] - IvHA + sialic acid derivative<br />
**[[4we9]], [[4wss]] - IvHA + sialic acid derivative<br />
**[[4f23]] - IvHA precursor<br />
**[[4f23]] - IvHA precursor<br />
**[[1ha0]] – IvHA precursor (mutant) <br />
**[[1ha0]] – IvHA precursor (mutant) <br />
-
**[[3whe]], [[4lvh]], [[6n5e]], [[6n5d]], [[6n5b]], [[6iuv]], [[6iut]], [[6e56]], [[6e4x]], [[6d0u]], [[6a4k]], [[6a67]], [[6a0z]] - IvHA + antibody<br />
+
**[[3whe]], [[4lvh]], [[6n5e]], [[6n5d]], [[6n5b]], [[6iuv]], [[6iut]], [[6e56]], [[6e4x]], [[6d0u]], [[6a4k]], [[6a67]], [[6a0z]], [[6oc3]], [[6ocb]], [[6p3r]], [[6p3s]], [[6pdx]], [[6q0e]], [[6q0h]], [[6q0i]], [[6q0l]], [[6q0o]], [[6q18]], [[6ur5]] - IvHA + antibody<br />
**[[6cnv]] - IvHA + envelope glycoprotein + SD84H + antibody<br />
**[[6cnv]] - IvHA + envelope glycoprotein + SD84H + antibody<br />
 +
**[[6vmz]] - IvHA + inhibitor<br />
*''IvHA subunit HA1''
*''IvHA subunit HA1''
Line 38: Line 42:
**[[2yp2]], [[2yp3]], [[2yp4]], [[2yp5]], [[2yp7]], [[2yp8]], [[2yp9]], [[3uyx]], [[4fiu]], [[5xl8]] - IvHA1 (mutant)<br />
**[[2yp2]], [[2yp3]], [[2yp4]], [[2yp5]], [[2yp7]], [[2yp8]], [[2yp9]], [[3uyx]], [[4fiu]], [[5xl8]] - IvHA1 (mutant)<br />
**[[5xla]], [[5xl9]] - IvHA1 (mutant) + sialic acid derivative<br />
**[[5xla]], [[5xl9]] - IvHA1 (mutant) + sialic acid derivative<br />
-
**[[2vis]], [[2vit]] - IvHA1 (mutant) + antibody<br />
 
**[[4fqj]], [[4hkx]], [[4fp8]], [[4m5z]], [[5xhv]], [[5w0d]], [[5w08]], [[5vag]] - IvHA1 + antibody<br />
**[[4fqj]], [[4hkx]], [[4fp8]], [[4m5z]], [[5xhv]], [[5w0d]], [[5w08]], [[5vag]] - IvHA1 + antibody<br />
 +
**[[2vis]], [[2vit]] - IvHA1 (mutant) + antibody<br />
*''IvHA subunit HA2''
*''IvHA subunit HA2''
Line 49: Line 53:
*''IvHA subunit HA1+HA2''
*''IvHA subunit HA1+HA2''
-
**[[3m5g]], [[3al4]], [[3lzg]], [[3m6s]], [[3ku3]], [[3ku5]], [[3hto]], [[3eyj]], [[3bt6]], [[1ru7]], [[1ruy]], [[1ruz]], [[1rd8]], [[1mql]], [[1htm]], [[2hmg]], [[3hmg]], [[4hmg]], [[5hmg]], [[1jsd]], [[1jsm]], [[3s11]], [[3s12]], [[3s13]], [[2ypg]], [[4dj6]], [[4dj7]], [[4dj8]], [[4bgw]], [[4bgz]], [[4bh2]], [[4bsa]], [[4bsg]], [[4eda]], [[4edb]], [[4h32]], [[4k62]], [[4k63]], [[4kdq]], [[4kpq]], [[4kps]], [[4fnk]], [[4fqm]], [[4k3x]], [[4kol]], [[4kth]], [[4lcx]], [[4ln3]], [[4ln6]], [[4lxv]], [[4m40]], [[4mc5]], [[4mhi]], [[4n5j]], [[4n5k]], [[4cyv]], [[4juk]], [[4jul]], [[4jum]], [[4jun]], [[4kw1]], [[4kwm]], [[4o5n]], [[4qy0]], [[4uo0]], [[4uo4]], [[4w8n]], [[4we4]], [[4we5]], [[4wst]], [[4wsw]], [[4wsx]], [[4xkd]], [[4xq5]], [[5vjk]], [[5tg8]], [[5huf]], [[5hu8]], [[5dut]], [[5bny]], [[4unz]], [[4uny]], [[4unx]], [[4unw]], [[4d00]], [[6d7u]], [[6d8b]], [[6d8d]], [[6d7c]], [[6bkp]], [[6aor]], [[6aoq]], [[5xl1]], [[6nsb]], [[6nsa]], [[6ns9]], [[6n5a]], [[6n4f]], [[5xrt]], [[5xrs]] - IvHA1 + HA2<br />
+
**[[3m5g]], [[3al4]], [[3lzg]], [[3m6s]], [[3ku3]], [[3ku5]], [[3hto]], [[3eyj]], [[3bt6]], [[1ru7]], [[1ruy]], [[1ruz]], [[1rd8]], [[1mql]], [[1htm]], [[2hmg]], [[3hmg]], [[4hmg]], [[5hmg]], [[1jsd]], [[1jsm]], [[3s11]], [[3s12]], [[3s13]], [[2ypg]], [[4dj6]], [[4dj7]], [[4dj8]], [[4bgw]], [[4bgz]], [[4bh2]], [[4bsa]], [[4bsg]], [[4eda]], [[4edb]], [[4h32]], [[4k62]], [[4k63]], [[4kdq]], [[4kpq]], [[4kps]], [[4fnk]], [[4fqm]], [[4k3x]], [[4kol]], [[4kth]], [[4lcx]], [[4ln3]], [[4ln6]], [[4lxv]], [[4m40]], [[4mc5]], [[4mhi]], [[4n5j]], [[4n5k]], [[4cyv]], [[4juk]], [[4jul]], [[4jum]], [[4jun]], [[4kw1]], [[4kwm]], [[4o5n]], [[4qy0]], [[4uo0]], [[4uo4]], [[4w8n]], [[4we4]], [[4we5]], [[4wst]], [[4wsw]], [[4wsx]], [[4xkd]], [[4xq5]], [[5vjk]], [[5tg8]], [[5huf]], [[5hu8]], [[5dut]], [[5bny]], [[4unz]], [[4uny]], [[4unx]], [[4unw]], [[4d00]], [[6d7u]], [[6d8b]], [[6d8d]], [[6d7c]], [[6bkp]], [[6aor]], [[6aoq]], [[5xl1]], [[6nsb]], [[6nsa]], [[6ns9]], [[6n5a]], [[6n4f]], [[5xrt]], [[5xrs]], [[6tzb]], [[6v44]], [[6v46]], [[6h47]], [[6v48]], [[6h49]] - IvHA1 + HA2<br />
-
**[[6hjn]], [[6hjr]] - IvHA1 + HA2 – Cryo EM<br />
+
**[[6hjn]], [[6hjr]], [[6y5g]], [[6y5h]], [[6y5i]], [[6y5j]], [[6y5k]], [[6y5l]] - IvHA1 + HA2 – Cryo EM<br />
-
**[[4cqp]], [[4cqq]], [[4cqr]], [[4cqs]], [[4cqu]], [[4cqv]], [[4cr0]], [[4uo3]], [[4n5z]], [[4nrj]], [[4nrk]], [[4nrl]], [[3ku6]], [[4f3z]], [[4jtx]], [[4ju0]], [[4jug]], [[4juh]], [[4juj]], [[4k65]], [[4kdm]], [[3zpa]], [[4gxx]], [[4n5y]], [[5thb]], [[5th0]], [[5tgo]], [[4zcj]], [[6bko]], [[6bkn]], [[6bkm]], [[6aop]], [[5xlb]], [[5xl5]], [[5vtz]], [[5vtx]], [[5vtu]], [[6nsg]], [[6nsf]], [[6nsc]], [[6e7h]], [[6e7g]] - IvHA1 (mutant) + HA2<br />
+
**[[4cqp]], [[4cqq]], [[4cqr]], [[4cqs]], [[4cqu]], [[4cqv]], [[4cr0]], [[4uo3]], [[4n5z]], [[4nrj]], [[4nrk]], [[4nrl]], [[3ku6]], [[4f3z]], [[4jtx]], [[4ju0]], [[4jug]], [[4juh]], [[4juj]], [[4k65]], [[4kdm]], [[3zpa]], [[4gxx]], [[4n5y]], [[5thb]], [[5th0]], [[5tgo]], [[4zcj]], [[6bko]], [[6bkn]], [[6bkm]], [[6aop]], [[5xlb]], [[5xl5]], [[5vtz]], [[5vtx]], [[5vtu]], [[6nsg]], [[6nsf]], [[6nsc]], [[6e7h]], [[6e7g]], [[6icw]], [[6icx]], [[6icy]], [[6id2]], [[6id3]], [[6id5]], [[6id8]], [[6id9]], [[6ida]], [[6idb]], [[6idz]] - IvHA1 (mutant) + HA2<br />
-
**[[3ku6]], [[4f3z]], [[4jtx]], [[4ju0]], [[4jug]], [[4juh]], [[4juj]], [[4k65]], [[4kdm]], [[3zpa]], [[4gxx]], [[4n5y]], [[4n5z]], [[4nrj]], [[4nrk]], [[4nrl]] - IvHA1 (mutant) + HA2<br />
+
**[[2viu]], [[3vun]], [[5thf]] - IvHA1 (mutant) + HA2 (mutant) <br />
**[[2viu]], [[3vun]], [[5thf]] - IvHA1 (mutant) + HA2 (mutant) <br />
-
**[[4i78]], [[4m4y]], [[3qqb]], [[3qqe]], [[3qqo]] - IvHA1 + HA2 (mutant)<br />
+
**[[4i78]], [[4m4y]], [[3qqb]], [[3qqe]], [[3qqo]], [[6nhp]], [[6nhq]], [[6nhr]] - IvHA1 + HA2 (mutant)<br />
**[[1jsh]], [[1jsi]], [[1jsn]], [[1jso]], [[4bgx]], [[4bgy]], [[4bh0]], [[4bh1]], [[4bh3]], [[4bh4]], [[4bsb]], [[4bsc]], [[4bsd]], [[4bsh]], [[4bsi]], [[4jtv]], [[4k64]], [[3znk]], [[3znl]], [[3znm]], [[3zp0]], [[3zp1]], [[4ln4]], [[4ln8]], [[4m44]], [[4bse]], [[4bsf]], [[4cyw]], [[4cyz]], [[4cz0]], [[4n62]], [[4qy1]], [[4qy2]], [[4uo1]], [[4uo2]], [[4uo5]], [[4uo6]], [[4uo7]], [[4uo8]], [[4uoa]], [[4wa2]], [[4wsu]], [[4wsv]], [[4xke]], [[4xkf]], [[4xkg]], [[4xqo]], [[4xqu]], [[5ajm]], [[5tg9]], [[5br6]], [[5br3]], [[5br0]], [[5bqz]], [[5bqy]], [[4yyb]], [[4yya]], [[4yy9]], [[4yy7]], [[4yy1]], [[4yy0]], [[6bkt]], [[6aov]], [[6aou]], [[6aot]], [[6aos]], [[5xl4]], [[5xl3]] - IvHA1 + HA2 + sialic acid derivative<br />
**[[1jsh]], [[1jsi]], [[1jsn]], [[1jso]], [[4bgx]], [[4bgy]], [[4bh0]], [[4bh1]], [[4bh3]], [[4bh4]], [[4bsb]], [[4bsc]], [[4bsd]], [[4bsh]], [[4bsi]], [[4jtv]], [[4k64]], [[3znk]], [[3znl]], [[3znm]], [[3zp0]], [[3zp1]], [[4ln4]], [[4ln8]], [[4m44]], [[4bse]], [[4bsf]], [[4cyw]], [[4cyz]], [[4cz0]], [[4n62]], [[4qy1]], [[4qy2]], [[4uo1]], [[4uo2]], [[4uo5]], [[4uo6]], [[4uo7]], [[4uo8]], [[4uoa]], [[4wa2]], [[4wsu]], [[4wsv]], [[4xke]], [[4xkf]], [[4xkg]], [[4xqo]], [[4xqu]], [[5ajm]], [[5tg9]], [[5br6]], [[5br3]], [[5br0]], [[5bqz]], [[5bqy]], [[4yyb]], [[4yya]], [[4yy9]], [[4yy7]], [[4yy1]], [[4yy0]], [[6bkt]], [[6aov]], [[6aou]], [[6aot]], [[6aos]], [[5xl4]], [[5xl3]] - IvHA1 + HA2 + sialic acid derivative<br />
**[[6cf5]], [[6ce6]] - IvHA1 + HA2 + taurine derivative<br />
**[[6cf5]], [[6ce6]] - IvHA1 + HA2 + taurine derivative<br />
Line 64: Line 67:
**[[3r2x]] – IvHA1 receptor-binding domain + HA2 fusion subunit + designed HA-binding protein <br />
**[[3r2x]] – IvHA1 receptor-binding domain + HA2 fusion subunit + designed HA-binding protein <br />
**[[2fk0]] - IvHA14 receptor-binding domain + HA2 membrane-fusion domain<br />
**[[2fk0]] - IvHA14 receptor-binding domain + HA2 membrane-fusion domain<br />
-
**[[3lzf]], [[3gbm]], [[3gbn]], [[3fku]], [[1ken]], [[1eo8]], [[1qfu]], [[2vir]], [[3sdy]], [[3ztj]], [[3ztn]], [[4gms]], [[4f15]], [[4hf5]], [[4hfu]], [[4hg4]], [[4hlz]], [[4kvn]], [[4fqi]], [[4fqk]], [[4gxu]], [[4fqr]], [[4fqv]], [[4fqy]], [[4mhh]], [[4mhj]], [[4nm8]], [[4o58]], [[4o5i]], [[4py8]], [[5v2a]], [[5umn]], [[5ugy]], [[5kaq]], [[5kan]], [[5k9q]], [[5k9o]], [[5k9k]], [[5jw4]], [[5jw3]], [[5ibl]], [[5gjt]], [[5gjs]], [[5dur]], [[5dup]], [[5dum]], [[5a3i]], [[4yk4]], [[4yjz]], [[4xrc]], [[4xnq]], [[4xnm]], [[4ubd]], [[4r8w]], [[6b3m]], [[5wko]], [[5w6g]], [[5ug0]], [[6nz7]], [[6ml8]], [[6ii9]], [[6ii8]], [[6ii4]], [[6fyw]], [[6fyu]], [[6fyt]], [[6e3h]], [[5y2m]], [[5y2l]], [[5xku]], [[5w42]] - IvHA1 + HA2 + antibody<br />
+
**[[3lzf]], [[3gbm]], [[3gbn]], [[3fku]], [[1ken]], [[1eo8]], [[1qfu]], [[2vir]], [[3sdy]], [[3ztj]], [[3ztn]], [[4gms]], [[4f15]], [[4hf5]], [[4hfu]], [[4hg4]], [[4hlz]], [[4kvn]], [[4fqi]], [[4fqk]], [[4gxu]], [[4fqr]], [[4fqv]], [[4fqy]], [[4mhh]], [[4mhj]], [[4nm8]], [[4o58]], [[4o5i]], [[4py8]], [[5v2a]], [[5umn]], [[5ugy]], [[5kaq]], [[5kan]], [[5k9q]], [[5k9o]], [[5k9k]], [[5jw4]], [[5jw3]], [[5ibl]], [[5gjt]], [[5gjs]], [[5dur]], [[5dup]], [[5dum]], [[5a3i]], [[4yk4]], [[4yjz]], [[4xrc]], [[4xnq]], [[4xnm]], [[4ubd]], [[4r8w]], [[6b3m]], [[5wko]], [[5w6g]], [[5ug0]], [[6nz7]], [[6ml8]], [[6ii9]], [[6ii8]], [[6ii4]], [[6fyw]], [[6fyu]], [[6fyt]], [[6e3h]], [[5y2m]], [[5y2l]], [[5xku]], [[5w42]], [[6wiz]], [[6wj1]] - IvHA1 + HA2 + antibody<br />
**[[5t6s]], [[5t6n]] - IvHA1 + HA2 + drug<br />
**[[5t6s]], [[5t6n]] - IvHA1 + HA2 + drug<br />
**[[5uk2]], [[5uk1]], [[5uk0]], [[5ujz]], [[6mlm]], [[6hjp]], [[6hjq]] - IvHA1 + HA2 + antibody – Cryo EM<br />
**[[5uk2]], [[5uk1]], [[5uk0]], [[5ujz]], [[6mlm]], [[6hjp]], [[6hjq]] - IvHA1 + HA2 + antibody – Cryo EM<br />
Line 90: Line 93:
**[[5b2c]] - MvHN - Mumps virus<br />
**[[5b2c]] - MvHN - Mumps virus<br />
**[[5b2d]] - MvHN + sialyllactose<br />
**[[5b2d]] - MvHN + sialyllactose<br />
-
**[[gjjn]], [[6jjm]] – HN – mumps rubulavirus<br />
+
**[[6jjn]], [[6jjm]] – HN – mumps rubulavirus<br />
 +
**[[6sg8]] - HN – sosuga rubulavirus<br />
*Measles virus hemagglutinin
*Measles virus hemagglutinin

Revision as of 09:35, 16 August 2020

3D structures of hemagglutinin

Updated on 16-August-2020

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel

Personal tools