Hemagglutinin 3D structures
From Proteopedia
(Difference between revisions)
(New page: ==3D structures of hemagglutinin== Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} {{#tree:id=OrganizedByTopic|openlevels=0| *Various hemagglutinin **[[3aj5...) |
|||
Line 18: | Line 18: | ||
**[[4fbv]] - MxHA + glucoside<br /> | **[[4fbv]] - MxHA + glucoside<br /> | ||
**[[6d7y]] – HA + immune protein – ''Pseudomonas aeruginosa''<br /> | **[[6d7y]] – HA + immune protein – ''Pseudomonas aeruginosa''<br /> | ||
+ | **[[1rwr]] – HA filamentous – ''Bordetella pertussis''<br /> | ||
+ | **[[6efc]] – SgHA 220-453 – ''Streptococcus gordonii''<br /> | ||
+ | **[[6efd]] – SgHA + trisaccharide<br /> | ||
*Influenza hemagglutinin (IvHA) | *Influenza hemagglutinin (IvHA) | ||
Line 24: | Line 27: | ||
**[[2dci]], [[1xoo]], [[1xop]] - IvHA fusion domain (mutant) – NMR<br /> | **[[2dci]], [[1xoo]], [[1xop]] - IvHA fusion domain (mutant) – NMR<br /> | ||
**[[6chx]] - IvHA head domain<br /> | **[[6chx]] - IvHA head domain<br /> | ||
- | **[[2ibx]], [[1ti8]], [[2wr0]], [[2wr1]], [[2wr2]], [[2wr3]], [[2wr4]], [[2wr5]], [[2wr7]], [[2wrb]], [[2wrc]], [[2wrd]], [[2wre]], [[2wrf]], [[2wrg]], [[2wrh]], [[3uyw]], [[4wa1]], [[4we8]], [[4wea]], [[4wsr]], [[6d8w]], [[6osr]], [[6ona]], [[6n41]], [[6n08]], [[6mzk]], [[6mym]], [[6mya]], [[6mxu]], [[5ykc]] – IvHA<br /> | + | **[[2ibx]], [[1ti8]], [[2wr0]], [[2wr1]], [[2wr2]], [[2wr3]], [[2wr4]], [[2wr5]], [[2wr7]], [[2wrb]], [[2wrc]], [[2wrd]], [[2wre]], [[2wrf]], [[2wrg]], [[2wrh]], [[3uyw]], [[4wa1]], [[4we8]], [[4wea]], [[4wsr]], [[6d8w]], [[6osr]], [[6ona]], [[6n41]], [[6n08]], [[6mzk]], [[6mym]], [[6mya]], [[6mxu]], [[5ykc]], [[6pcx]], [[6pd3]], [[6pd5]], [[6pd6]], [[6wxb]] – IvHA<br /> |
- | **[[5z88]], [[5yt9]], [[5yt8]] - IvHA (mutant)<br /> | + | **[[5z88]], [[5yt9]], [[5yt8]], [[6idd]], [[6iig]], [[6ijt]], [[6in5]], [[6kcj]], [[6ntf]], [[6p6p]] - IvHA (mutant)<br /> |
**[[4we9]], [[4wss]] - IvHA + sialic acid derivative<br /> | **[[4we9]], [[4wss]] - IvHA + sialic acid derivative<br /> | ||
**[[4f23]] - IvHA precursor<br /> | **[[4f23]] - IvHA precursor<br /> | ||
**[[1ha0]] – IvHA precursor (mutant) <br /> | **[[1ha0]] – IvHA precursor (mutant) <br /> | ||
- | **[[3whe]], [[4lvh]], [[6n5e]], [[6n5d]], [[6n5b]], [[6iuv]], [[6iut]], [[6e56]], [[6e4x]], [[6d0u]], [[6a4k]], [[6a67]], [[6a0z]] - IvHA + antibody<br /> | + | **[[3whe]], [[4lvh]], [[6n5e]], [[6n5d]], [[6n5b]], [[6iuv]], [[6iut]], [[6e56]], [[6e4x]], [[6d0u]], [[6a4k]], [[6a67]], [[6a0z]], [[6oc3]], [[6ocb]], [[6p3r]], [[6p3s]], [[6pdx]], [[6q0e]], [[6q0h]], [[6q0i]], [[6q0l]], [[6q0o]], [[6q18]], [[6ur5]] - IvHA + antibody<br /> |
**[[6cnv]] - IvHA + envelope glycoprotein + SD84H + antibody<br /> | **[[6cnv]] - IvHA + envelope glycoprotein + SD84H + antibody<br /> | ||
+ | **[[6vmz]] - IvHA + inhibitor<br /> | ||
*''IvHA subunit HA1'' | *''IvHA subunit HA1'' | ||
Line 38: | Line 42: | ||
**[[2yp2]], [[2yp3]], [[2yp4]], [[2yp5]], [[2yp7]], [[2yp8]], [[2yp9]], [[3uyx]], [[4fiu]], [[5xl8]] - IvHA1 (mutant)<br /> | **[[2yp2]], [[2yp3]], [[2yp4]], [[2yp5]], [[2yp7]], [[2yp8]], [[2yp9]], [[3uyx]], [[4fiu]], [[5xl8]] - IvHA1 (mutant)<br /> | ||
**[[5xla]], [[5xl9]] - IvHA1 (mutant) + sialic acid derivative<br /> | **[[5xla]], [[5xl9]] - IvHA1 (mutant) + sialic acid derivative<br /> | ||
- | **[[2vis]], [[2vit]] - IvHA1 (mutant) + antibody<br /> | ||
**[[4fqj]], [[4hkx]], [[4fp8]], [[4m5z]], [[5xhv]], [[5w0d]], [[5w08]], [[5vag]] - IvHA1 + antibody<br /> | **[[4fqj]], [[4hkx]], [[4fp8]], [[4m5z]], [[5xhv]], [[5w0d]], [[5w08]], [[5vag]] - IvHA1 + antibody<br /> | ||
+ | **[[2vis]], [[2vit]] - IvHA1 (mutant) + antibody<br /> | ||
*''IvHA subunit HA2'' | *''IvHA subunit HA2'' | ||
Line 49: | Line 53: | ||
*''IvHA subunit HA1+HA2'' | *''IvHA subunit HA1+HA2'' | ||
- | **[[3m5g]], [[3al4]], [[3lzg]], [[3m6s]], [[3ku3]], [[3ku5]], [[3hto]], [[3eyj]], [[3bt6]], [[1ru7]], [[1ruy]], [[1ruz]], [[1rd8]], [[1mql]], [[1htm]], [[2hmg]], [[3hmg]], [[4hmg]], [[5hmg]], [[1jsd]], [[1jsm]], [[3s11]], [[3s12]], [[3s13]], [[2ypg]], [[4dj6]], [[4dj7]], [[4dj8]], [[4bgw]], [[4bgz]], [[4bh2]], [[4bsa]], [[4bsg]], [[4eda]], [[4edb]], [[4h32]], [[4k62]], [[4k63]], [[4kdq]], [[4kpq]], [[4kps]], [[4fnk]], [[4fqm]], [[4k3x]], [[4kol]], [[4kth]], [[4lcx]], [[4ln3]], [[4ln6]], [[4lxv]], [[4m40]], [[4mc5]], [[4mhi]], [[4n5j]], [[4n5k]], [[4cyv]], [[4juk]], [[4jul]], [[4jum]], [[4jun]], [[4kw1]], [[4kwm]], [[4o5n]], [[4qy0]], [[4uo0]], [[4uo4]], [[4w8n]], [[4we4]], [[4we5]], [[4wst]], [[4wsw]], [[4wsx]], [[4xkd]], [[4xq5]], [[5vjk]], [[5tg8]], [[5huf]], [[5hu8]], [[5dut]], [[5bny]], [[4unz]], [[4uny]], [[4unx]], [[4unw]], [[4d00]], [[6d7u]], [[6d8b]], [[6d8d]], [[6d7c]], [[6bkp]], [[6aor]], [[6aoq]], [[5xl1]], [[6nsb]], [[6nsa]], [[6ns9]], [[6n5a]], [[6n4f]], [[5xrt]], [[5xrs]] - IvHA1 + HA2<br /> | + | **[[3m5g]], [[3al4]], [[3lzg]], [[3m6s]], [[3ku3]], [[3ku5]], [[3hto]], [[3eyj]], [[3bt6]], [[1ru7]], [[1ruy]], [[1ruz]], [[1rd8]], [[1mql]], [[1htm]], [[2hmg]], [[3hmg]], [[4hmg]], [[5hmg]], [[1jsd]], [[1jsm]], [[3s11]], [[3s12]], [[3s13]], [[2ypg]], [[4dj6]], [[4dj7]], [[4dj8]], [[4bgw]], [[4bgz]], [[4bh2]], [[4bsa]], [[4bsg]], [[4eda]], [[4edb]], [[4h32]], [[4k62]], [[4k63]], [[4kdq]], [[4kpq]], [[4kps]], [[4fnk]], [[4fqm]], [[4k3x]], [[4kol]], [[4kth]], [[4lcx]], [[4ln3]], [[4ln6]], [[4lxv]], [[4m40]], [[4mc5]], [[4mhi]], [[4n5j]], [[4n5k]], [[4cyv]], [[4juk]], [[4jul]], [[4jum]], [[4jun]], [[4kw1]], [[4kwm]], [[4o5n]], [[4qy0]], [[4uo0]], [[4uo4]], [[4w8n]], [[4we4]], [[4we5]], [[4wst]], [[4wsw]], [[4wsx]], [[4xkd]], [[4xq5]], [[5vjk]], [[5tg8]], [[5huf]], [[5hu8]], [[5dut]], [[5bny]], [[4unz]], [[4uny]], [[4unx]], [[4unw]], [[4d00]], [[6d7u]], [[6d8b]], [[6d8d]], [[6d7c]], [[6bkp]], [[6aor]], [[6aoq]], [[5xl1]], [[6nsb]], [[6nsa]], [[6ns9]], [[6n5a]], [[6n4f]], [[5xrt]], [[5xrs]], [[6tzb]], [[6v44]], [[6v46]], [[6h47]], [[6v48]], [[6h49]] - IvHA1 + HA2<br /> |
- | **[[6hjn]], [[6hjr]] - IvHA1 + HA2 – Cryo EM<br /> | + | **[[6hjn]], [[6hjr]], [[6y5g]], [[6y5h]], [[6y5i]], [[6y5j]], [[6y5k]], [[6y5l]] - IvHA1 + HA2 – Cryo EM<br /> |
- | **[[4cqp]], [[4cqq]], [[4cqr]], [[4cqs]], [[4cqu]], [[4cqv]], [[4cr0]], [[4uo3]], [[4n5z]], [[4nrj]], [[4nrk]], [[4nrl]], [[3ku6]], [[4f3z]], [[4jtx]], [[4ju0]], [[4jug]], [[4juh]], [[4juj]], [[4k65]], [[4kdm]], [[3zpa]], [[4gxx]], [[4n5y]], [[5thb]], [[5th0]], [[5tgo]], [[4zcj]], [[6bko]], [[6bkn]], [[6bkm]], [[6aop]], [[5xlb]], [[5xl5]], [[5vtz]], [[5vtx]], [[5vtu]], [[6nsg]], [[6nsf]], [[6nsc]], [[6e7h]], [[6e7g | + | **[[4cqp]], [[4cqq]], [[4cqr]], [[4cqs]], [[4cqu]], [[4cqv]], [[4cr0]], [[4uo3]], [[4n5z]], [[4nrj]], [[4nrk]], [[4nrl]], [[3ku6]], [[4f3z]], [[4jtx]], [[4ju0]], [[4jug]], [[4juh]], [[4juj]], [[4k65]], [[4kdm]], [[3zpa]], [[4gxx]], [[4n5y]], [[5thb]], [[5th0]], [[5tgo]], [[4zcj]], [[6bko]], [[6bkn]], [[6bkm]], [[6aop]], [[5xlb]], [[5xl5]], [[5vtz]], [[5vtx]], [[5vtu]], [[6nsg]], [[6nsf]], [[6nsc]], [[6e7h]], [[6e7g]], [[6icw]], [[6icx]], [[6icy]], [[6id2]], [[6id3]], [[6id5]], [[6id8]], [[6id9]], [[6ida]], [[6idb]], [[6idz]] - IvHA1 (mutant) + HA2<br /> |
- | + | ||
**[[2viu]], [[3vun]], [[5thf]] - IvHA1 (mutant) + HA2 (mutant) <br /> | **[[2viu]], [[3vun]], [[5thf]] - IvHA1 (mutant) + HA2 (mutant) <br /> | ||
- | **[[4i78]], [[4m4y]], [[3qqb]], [[3qqe]], [[3qqo]] - IvHA1 + HA2 (mutant)<br /> | + | **[[4i78]], [[4m4y]], [[3qqb]], [[3qqe]], [[3qqo]], [[6nhp]], [[6nhq]], [[6nhr]] - IvHA1 + HA2 (mutant)<br /> |
**[[1jsh]], [[1jsi]], [[1jsn]], [[1jso]], [[4bgx]], [[4bgy]], [[4bh0]], [[4bh1]], [[4bh3]], [[4bh4]], [[4bsb]], [[4bsc]], [[4bsd]], [[4bsh]], [[4bsi]], [[4jtv]], [[4k64]], [[3znk]], [[3znl]], [[3znm]], [[3zp0]], [[3zp1]], [[4ln4]], [[4ln8]], [[4m44]], [[4bse]], [[4bsf]], [[4cyw]], [[4cyz]], [[4cz0]], [[4n62]], [[4qy1]], [[4qy2]], [[4uo1]], [[4uo2]], [[4uo5]], [[4uo6]], [[4uo7]], [[4uo8]], [[4uoa]], [[4wa2]], [[4wsu]], [[4wsv]], [[4xke]], [[4xkf]], [[4xkg]], [[4xqo]], [[4xqu]], [[5ajm]], [[5tg9]], [[5br6]], [[5br3]], [[5br0]], [[5bqz]], [[5bqy]], [[4yyb]], [[4yya]], [[4yy9]], [[4yy7]], [[4yy1]], [[4yy0]], [[6bkt]], [[6aov]], [[6aou]], [[6aot]], [[6aos]], [[5xl4]], [[5xl3]] - IvHA1 + HA2 + sialic acid derivative<br /> | **[[1jsh]], [[1jsi]], [[1jsn]], [[1jso]], [[4bgx]], [[4bgy]], [[4bh0]], [[4bh1]], [[4bh3]], [[4bh4]], [[4bsb]], [[4bsc]], [[4bsd]], [[4bsh]], [[4bsi]], [[4jtv]], [[4k64]], [[3znk]], [[3znl]], [[3znm]], [[3zp0]], [[3zp1]], [[4ln4]], [[4ln8]], [[4m44]], [[4bse]], [[4bsf]], [[4cyw]], [[4cyz]], [[4cz0]], [[4n62]], [[4qy1]], [[4qy2]], [[4uo1]], [[4uo2]], [[4uo5]], [[4uo6]], [[4uo7]], [[4uo8]], [[4uoa]], [[4wa2]], [[4wsu]], [[4wsv]], [[4xke]], [[4xkf]], [[4xkg]], [[4xqo]], [[4xqu]], [[5ajm]], [[5tg9]], [[5br6]], [[5br3]], [[5br0]], [[5bqz]], [[5bqy]], [[4yyb]], [[4yya]], [[4yy9]], [[4yy7]], [[4yy1]], [[4yy0]], [[6bkt]], [[6aov]], [[6aou]], [[6aot]], [[6aos]], [[5xl4]], [[5xl3]] - IvHA1 + HA2 + sialic acid derivative<br /> | ||
**[[6cf5]], [[6ce6]] - IvHA1 + HA2 + taurine derivative<br /> | **[[6cf5]], [[6ce6]] - IvHA1 + HA2 + taurine derivative<br /> | ||
Line 64: | Line 67: | ||
**[[3r2x]] – IvHA1 receptor-binding domain + HA2 fusion subunit + designed HA-binding protein <br /> | **[[3r2x]] – IvHA1 receptor-binding domain + HA2 fusion subunit + designed HA-binding protein <br /> | ||
**[[2fk0]] - IvHA14 receptor-binding domain + HA2 membrane-fusion domain<br /> | **[[2fk0]] - IvHA14 receptor-binding domain + HA2 membrane-fusion domain<br /> | ||
- | **[[3lzf]], [[3gbm]], [[3gbn]], [[3fku]], [[1ken]], [[1eo8]], [[1qfu]], [[2vir]], [[3sdy]], [[3ztj]], [[3ztn]], [[4gms]], [[4f15]], [[4hf5]], [[4hfu]], [[4hg4]], [[4hlz]], [[4kvn]], [[4fqi]], [[4fqk]], [[4gxu]], [[4fqr]], [[4fqv]], [[4fqy]], [[4mhh]], [[4mhj]], [[4nm8]], [[4o58]], [[4o5i]], [[4py8]], [[5v2a]], [[5umn]], [[5ugy]], [[5kaq]], [[5kan]], [[5k9q]], [[5k9o]], [[5k9k]], [[5jw4]], [[5jw3]], [[5ibl]], [[5gjt]], [[5gjs]], [[5dur]], [[5dup]], [[5dum]], [[5a3i]], [[4yk4]], [[4yjz]], [[4xrc]], [[4xnq]], [[4xnm]], [[4ubd]], [[4r8w]], [[6b3m]], [[5wko]], [[5w6g]], [[5ug0]], [[6nz7]], [[6ml8]], [[6ii9]], [[6ii8]], [[6ii4]], [[6fyw]], [[6fyu]], [[6fyt]], [[6e3h]], [[5y2m]], [[5y2l]], [[5xku]], [[5w42]] - IvHA1 + HA2 + antibody<br /> | + | **[[3lzf]], [[3gbm]], [[3gbn]], [[3fku]], [[1ken]], [[1eo8]], [[1qfu]], [[2vir]], [[3sdy]], [[3ztj]], [[3ztn]], [[4gms]], [[4f15]], [[4hf5]], [[4hfu]], [[4hg4]], [[4hlz]], [[4kvn]], [[4fqi]], [[4fqk]], [[4gxu]], [[4fqr]], [[4fqv]], [[4fqy]], [[4mhh]], [[4mhj]], [[4nm8]], [[4o58]], [[4o5i]], [[4py8]], [[5v2a]], [[5umn]], [[5ugy]], [[5kaq]], [[5kan]], [[5k9q]], [[5k9o]], [[5k9k]], [[5jw4]], [[5jw3]], [[5ibl]], [[5gjt]], [[5gjs]], [[5dur]], [[5dup]], [[5dum]], [[5a3i]], [[4yk4]], [[4yjz]], [[4xrc]], [[4xnq]], [[4xnm]], [[4ubd]], [[4r8w]], [[6b3m]], [[5wko]], [[5w6g]], [[5ug0]], [[6nz7]], [[6ml8]], [[6ii9]], [[6ii8]], [[6ii4]], [[6fyw]], [[6fyu]], [[6fyt]], [[6e3h]], [[5y2m]], [[5y2l]], [[5xku]], [[5w42]], [[6wiz]], [[6wj1]] - IvHA1 + HA2 + antibody<br /> |
**[[5t6s]], [[5t6n]] - IvHA1 + HA2 + drug<br /> | **[[5t6s]], [[5t6n]] - IvHA1 + HA2 + drug<br /> | ||
**[[5uk2]], [[5uk1]], [[5uk0]], [[5ujz]], [[6mlm]], [[6hjp]], [[6hjq]] - IvHA1 + HA2 + antibody – Cryo EM<br /> | **[[5uk2]], [[5uk1]], [[5uk0]], [[5ujz]], [[6mlm]], [[6hjp]], [[6hjq]] - IvHA1 + HA2 + antibody – Cryo EM<br /> | ||
Line 90: | Line 93: | ||
**[[5b2c]] - MvHN - Mumps virus<br /> | **[[5b2c]] - MvHN - Mumps virus<br /> | ||
**[[5b2d]] - MvHN + sialyllactose<br /> | **[[5b2d]] - MvHN + sialyllactose<br /> | ||
- | **[[ | + | **[[6jjn]], [[6jjm]] – HN – mumps rubulavirus<br /> |
+ | **[[6sg8]] - HN – sosuga rubulavirus<br /> | ||
*Measles virus hemagglutinin | *Measles virus hemagglutinin |
Revision as of 09:35, 16 August 2020
3D structures of hemagglutinin
Updated on 16-August-2020