Hemoglobin 3D structures
From Proteopedia
(Difference between revisions)
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**[[2dxm]] - hHb α+β – neutron<br /> | **[[2dxm]] - hHb α+β – neutron<br /> | ||
**[[2h35]] - hHb α+β – NMR<br /> | **[[2h35]] - hHb α+β – NMR<br /> | ||
| - | **[[1fn3]], [[1nih]], [[4n7p]], [[4n7o]] - hHb α+β+ Ni containing heme<br /> | + | **[[1fn3]], [[1nih]], [[4n7p]], [[4n7o]], [[6lcw]], [[6lcx]] - hHb α+β+ Ni containing heme<br /> |
**[[1qsh]], [[1qsi]] - hHb α+β+ Mg containing heme<br /> | **[[1qsh]], [[1qsi]] - hHb α+β+ Mg containing heme<br /> | ||
**[[1xy0]], [[1xz5]], [[1xzu]], [[1xzv]], [[1y0a]], [[1y0c]], [[1y0t]], [[1y0w]], [[1y22]], [[1y2z]], [[1y31]], [[1y35]], [[1y45]], [[1y46]], [[1y4b]], [[1y4f]], [[1y4g]], [[1y4p]], [[1y4q]], [[1y4r]], [[1y4v]], [[1xye]], [[1xz4]], [[1xz7]], [[1y09]], [[1y0d]], [[1o1j]], [[1o1k]], [[1o1l]], [[1o1m]], [[1o1n]], [[1o1o]], [[1o1p]], [[1j7s]], [[1j7w]], [[1j7y]], [[1c7b]], [[1c7c]], [[1c7d]], [[1ch4]], [[1bzz]], [[6hbw]], [[1abw]], [[1a30]], [[1a00]], [[1a01]], [[1a0u]], [[1a0z]], [[1gbu]], [[1gli]], [[1hdb]], [[1dxt]], [[1dxu]], [[1dxv]], [[4mqh]], [[4mqi]] - hHb α+β (mutant)<br /> | **[[1xy0]], [[1xz5]], [[1xzu]], [[1xzv]], [[1y0a]], [[1y0c]], [[1y0t]], [[1y0w]], [[1y22]], [[1y2z]], [[1y31]], [[1y35]], [[1y45]], [[1y46]], [[1y4b]], [[1y4f]], [[1y4g]], [[1y4p]], [[1y4q]], [[1y4r]], [[1y4v]], [[1xye]], [[1xz4]], [[1xz7]], [[1y09]], [[1y0d]], [[1o1j]], [[1o1k]], [[1o1l]], [[1o1m]], [[1o1n]], [[1o1o]], [[1o1p]], [[1j7s]], [[1j7w]], [[1j7y]], [[1c7b]], [[1c7c]], [[1c7d]], [[1ch4]], [[1bzz]], [[6hbw]], [[1abw]], [[1a30]], [[1a00]], [[1a01]], [[1a0u]], [[1a0z]], [[1gbu]], [[1gli]], [[1hdb]], [[1dxt]], [[1dxu]], [[1dxv]], [[4mqh]], [[4mqi]] - hHb α+β (mutant)<br /> | ||
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**[[3cy5]] - Hb α+β – buffalo<br /> | **[[3cy5]] - Hb α+β – buffalo<br /> | ||
**[[3vre]], [[3vrg]] - maHb α+β – mammoth<br /> | **[[3vre]], [[3vrg]] - maHb α+β – mammoth<br /> | ||
| - | **[[2zlt]], [[2zlu]], [[2zlv]], [[2zlw]], [[2zlx]], [[1y8h]], [[1y8i]], [[1y8k]], [[1ns6]], [[1ibe]], [[2dhb]] - hoHb α+β – horse<br /> | + | **[[2zlt]], [[2zlu]], [[2zlv]], [[2zlw]], [[2zlx]], [[1y8h]], [[1y8i]], [[1y8k]], [[1ns6]], [[1ibe]], [[2dhb]], [[6r2o]], [[6sva]] - hoHb α+β – horse<br /> |
**[[1s0h]] - Hb α+β – donkey<br /> | **[[1s0h]] - Hb α+β – donkey<br /> | ||
**[[1fhj]] - Hb α+β – wolf<br /> | **[[1fhj]] - Hb α+β – wolf<br /> | ||
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**[[3hrw]] - mHb α+β – mouse<br /> | **[[3hrw]] - mHb α+β – mouse<br /> | ||
**[[5ker]], [[4h2l]] - Hb α+β - deer mouse<br /> | **[[5ker]], [[4h2l]] - Hb α+β - deer mouse<br /> | ||
| - | **[[3k8b]] - tHb α+β - turkey<br /> | + | **[[3k8b]], [[6zmx]], [[6zmy]] - tHb α+β - turkey<br /> |
**[[3eok]] - Hb α+β – duck<br /> | **[[3eok]] - Hb α+β – duck<br /> | ||
**[[2zfb]] - Hb α+β - parrot<br /> | **[[2zfb]] - Hb α+β - parrot<br /> | ||
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**[[1cg5]] - rsHb α+β – Red stingray<br /> | **[[1cg5]] - rsHb α+β – Red stingray<br /> | ||
**[[3lhb]], [[1f5o]], [[1uc3]] - slHb α+β – Sea lamprey<br /> | **[[3lhb]], [[1f5o]], [[1uc3]] - slHb α+β – Sea lamprey<br /> | ||
| + | **[[6hit]] - Hb α2+β4 – cod<br /> | ||
**[[2c0k]] - Hb α+β – botfly<br /> | **[[2c0k]] - Hb α+β – botfly<br /> | ||
**[[3at5]], [[3at6]] – Hb α+β – ''Podocnemis unifilis''<br /> | **[[3at5]], [[3at6]] – Hb α+β – ''Podocnemis unifilis''<br /> | ||
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**[[3ogb]], [[2w6x]], [[2w6y]] – SwHb (mutant) – Sperm whale<br /> | **[[3ogb]], [[2w6x]], [[2w6y]] – SwHb (mutant) – Sperm whale<br /> | ||
**[[2bk9]] – DmHb - ''Drosophila melanogaster''<br /> | **[[2bk9]] – DmHb - ''Drosophila melanogaster''<br /> | ||
| + | **[[4bja]] - Hb – ''Caenorhabditis elegans''<br /> | ||
| + | **[[6otw]], [[6otx]], [[6oty]] - Hb II + Hb III – thick lucine<br /> | ||
**[[2r50]] - Hb – corn<br /> | **[[2r50]] - Hb – corn<br /> | ||
**[[2gnv]], [[2gnw]] – rHb (mutant) – rice<br /> | **[[2gnv]], [[2gnw]] – rHb (mutant) – rice<br /> | ||
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**[[2hbg]] - GdHb – ''Glycera dibranchiata''<br /> | **[[2hbg]] - GdHb – ''Glycera dibranchiata''<br /> | ||
**[[3qqr]] – Hb non-legume – ''Parasponia andersonii'' <br /> | **[[3qqr]] – Hb non-legume – ''Parasponia andersonii'' <br /> | ||
| - | **[[4bja]] - Hb – ''Caenorhabditis elegans''<br /> | ||
**[[2ksc]], 1mwb – Hb – ''Synechococcus'' – NMR<br /> | **[[2ksc]], 1mwb – Hb – ''Synechococcus'' – NMR<br /> | ||
**[[2zwj]], [[1x3k]], [[3arj]], [[3ark]], [[3arl]] - TaHb V – ''Tokunagayusurika akamusi''<br /> | **[[2zwj]], [[1x3k]], [[3arj]], [[3ark]], [[3arl]] - TaHb V – ''Tokunagayusurika akamusi''<br /> | ||
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*Truncated hemoglobin | *Truncated hemoglobin | ||
| + | **[[4c44]], [[4c0n]] - TrHb – ''Arabidopsis thaliana''<br /> | ||
**[[1dlw]] – TrHb – ''Paramecium caudatum''<br /> | **[[1dlw]] – TrHb – ''Paramecium caudatum''<br /> | ||
**[[2bkm]] - TrHb +O2 - ''Geobacillus stearothermophilus''<br /> | **[[2bkm]] - TrHb +O2 - ''Geobacillus stearothermophilus''<br /> | ||
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**[[3aq6]] – TpTrHb III<br /> | **[[3aq6]] – TpTrHb III<br /> | ||
**[[3aq7]], [[3aq8]] - TpHb III (mutant)<br /> | **[[3aq7]], [[3aq8]] - TpHb III (mutant)<br /> | ||
| - | **[[4c44]], [[4c0n]] - TrHb – ''Arabidopsis thaliana''<br /> | ||
*Methemoglobin α subunit + β subunit | *Methemoglobin α subunit + β subunit | ||
| - | **[[1jy7]], [[1bz1]] - hMetHb α+β<br /> | + | **[[1jy7]], [[1bz1]], [[6nq5]] - hMetHb α+β<br /> |
**[[1vwt]] - hMetHb α+β (mutant)<br /> | **[[1vwt]] - hMetHb α+β (mutant)<br /> | ||
**[[4xs0]] - hMetHb α+β + ISDH<br /> | **[[4xs0]] - hMetHb α+β + ISDH<br /> | ||
| + | **[[6hk2]] - hMetHb + + chelator + O2<br /> | ||
**[[1ns9]], [[2mhb]] - hoMetHb α+β<br /> | **[[1ns9]], [[2mhb]] - hoMetHb α+β<br /> | ||
**[[2qu0]] - MetHb α+β – sheep<br /> | **[[2qu0]] - MetHb α+β – sheep<br /> | ||
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*Hemoglobin α subunit + β subunit + CO | *Hemoglobin α subunit + β subunit + CO | ||
| - | **[[3d17]], [[1yzi]], [[1j3y]], [[1j3z]], [[1j40]], [[1j41]], [[1ljw]], [[1ird]], [[1bbb]], [[1hco]], [[2hco]], [[2dn3]], [[3s65]], [[5e6e]], [[6hal]] | + | **[[3d17]], [[1yzi]], [[1j3y]], [[1j3z]], [[1j40]], [[1j41]], [[1ljw]], [[1ird]], [[1bbb]], [[1hco]], [[2hco]], [[2dn3]], [[3s65]], [[5e6e]], [[6hal]], [[6kao]], [[6kap]], [[6kaq]], [[6kar]], [[6kas]], [[6kat]], [[6kau]], [[6kav]], [[6kye]], [[6l5v]], [[6l5w]], [[6l5x]], [[6l5y]] - hHb α+β + CO<br /> |
**[[1mko]] - hHb α+β A + CO<br /> | **[[1mko]] - hHb α+β A + CO<br /> | ||
**[[1cbm]] - hHb α+β β4 + CO<br /> | **[[1cbm]] - hHb α+β β4 + CO<br /> | ||
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**[[1m9p]] - hHb α+β C + CO<br /> | **[[1m9p]] - hHb α+β C + CO<br /> | ||
**[[1coh]] - hHb α+β Co containing heme + CO<br /> | **[[1coh]] - hHb α+β Co containing heme + CO<br /> | ||
| + | **[[6ka9]], [[6kae]], [[6kah]], [[6kai]] - hHb + Ni containing heme + CO<br /> | ||
**[[1hab]], [[1hac]], [[1sdk]], [[1sdl]] - hHb α+β A crosslinked + CO<br /> | **[[1hab]], [[1hac]], [[1sdk]], [[1sdl]] - hHb α+β A crosslinked + CO<br /> | ||
**[[3nl7]], [[3nml]], [[3nmm]], [[1yvq]], [[1yvt]], [[1yff]], [[1aj9]], [[1rvw]], [[3qjb]], [[3qjc]], [[3qjd]], [[3qje]], [[3s66]], [[4mqc]], [[4mqg]], [[5sw7]] - hHb α+β (mutant) + CO<br /> | **[[3nl7]], [[3nml]], [[3nmm]], [[1yvq]], [[1yvt]], [[1yff]], [[1aj9]], [[1rvw]], [[3qjb]], [[3qjc]], [[3qjd]], [[3qje]], [[3s66]], [[4mqc]], [[4mqg]], [[5sw7]] - hHb α+β (mutant) + CO<br /> | ||
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**[[3vrf]] - maHb α+β + CO<br /> | **[[3vrf]] - maHb α+β + CO<br /> | ||
**[[1ouu]] - trHb α+β (mutant) + CO<br /> | **[[1ouu]] - trHb α+β (mutant) + CO<br /> | ||
| - | **[[ | + | **[[6rp5]] - Hb + + CO – Patagonian blennie<br /> |
| - | **[[1pbx]] - | + | **[[3gkv]], [[1pbx]] - roHb α+β + CO <br /> |
**[[1it3]] - haHb α+β +CO<br /> | **[[1it3]] - haHb α+β +CO<br /> | ||
**[[1spg]] - Hb α+β + CO - Spot croaker<br /> | **[[1spg]] - Hb α+β + CO - Spot croaker<br /> | ||
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*Hemoglobin complex with protein | *Hemoglobin complex with protein | ||
| - | + | **[[3szk]], [[3s48]] - hHb α+β + iron-regulated surface determinant protein H<br /> | |
| - | **[[3szk]], [[3s48]] - hHb α + iron-regulated surface determinant protein H<br /> | + | |
**[[4fc3]], [[4ij2]] - hHb α+β + iron-regulated surface determinant protein H<br /> | **[[4fc3]], [[4ij2]] - hHb α+β + iron-regulated surface determinant protein H<br /> | ||
| - | **[[5vmm]] - hHb +β + iron-regulated cell wall-anchored protein <br /> | + | **[[5vmm]] - hHb α+β + iron-regulated cell wall-anchored protein <br /> |
| + | **[[6tb2]] - hHb α+β + haptoglobin + heme transporter HARA<br /> | ||
**[[4x0l]] - hHb α+β + haptoglobin + O2<br /> | **[[4x0l]] - hHb α+β + haptoglobin + O2<br /> | ||
**[[5hu6]] - hHb α+β + haptoglobin + haptoglobin-Hb receptor + O2<br /> | **[[5hu6]] - hHb α+β + haptoglobin + haptoglobin-Hb receptor + O2<br /> | ||
**[[4wjg]], [[5jdo]] - hHb α+β + haptoglobin + haptoglobin-Hb receptor + haptoglobin receptor A + O2<br /> | **[[4wjg]], [[5jdo]] - hHb α+β + haptoglobin + haptoglobin-Hb receptor + haptoglobin receptor A + O2<br /> | ||
| - | **[[3ia3]] - hHb α+α | + | **[[3ia3]] - hHb α + α-Hb stabilizing protein<br /> |
**[[1z8u]], [[1y01]] - hHb α+α–Hb stabilizing protein (mutant)<br /> | **[[1z8u]], [[1y01]] - hHb α+α–Hb stabilizing protein (mutant)<br /> | ||
| - | **[[5ee4]] - hHb +β + Hb-haptoglobin utilization protein + O2<br /> | + | **[[5ee4]] - hHb α+β + Hb-haptoglobin utilization protein + O2<br /> |
**[[4f4o]] - piHb α+β + haptoglobin<br /> | **[[4f4o]] - piHb α+β + haptoglobin<br /> | ||
| - | **[[3bev]] – cHb α + MHC I + β-microglobulin<br /> | ||
**[[5m3l]] – Hb D1+L1+L2+L3 + globin A+B+C – earthworm – Cryo EM<br /> | **[[5m3l]] – Hb D1+L1+L2+L3 + globin A+B+C – earthworm – Cryo EM<br /> | ||
Revision as of 07:49, 17 August 2020
Updated on 17-August-2020 - For a general description of the protein see Hemoglobin
