1cem

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[[Image:1cem.jpg|left|200px]]
[[Image:1cem.jpg|left|200px]]
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{{Structure
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<!--
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|PDB= 1cem |SIZE=350|CAPTION= <scene name='initialview01'>1cem</scene>, resolution 1.65&Aring;
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The line below this paragraph, containing "STRUCTURE_1cem", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND=
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Cellulase Cellulase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.4 3.2.1.4] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE= CELA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1515 Clostridium thermocellum])
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|DOMAIN=
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{{STRUCTURE_1cem| PDB=1cem | SCENE= }}
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|RELATEDENTRY=
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1cem FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1cem OCA], [http://www.ebi.ac.uk/pdbsum/1cem PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1cem RCSB]</span>
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}}
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'''ENDOGLUCANASE A (CELA) CATALYTIC CORE, RESIDUES 33-395'''
'''ENDOGLUCANASE A (CELA) CATALYTIC CORE, RESIDUES 33-395'''
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[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Alzari, P M.]]
[[Category: Alzari, P M.]]
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[[Category: cellulase]]
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[[Category: Cellulase]]
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[[Category: clostridium thermocellum]]
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[[Category: Clostridium thermocellum]]
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[[Category: family d/8 of glycosyl hydrolase]]
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[[Category: Family d/8 of glycosyl hydrolase]]
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[[Category: glycosyl hydrolase]]
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[[Category: Glycosyl hydrolase]]
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[[Category: glycosyltransferase]]
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[[Category: Glycosyltransferase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 12:38:56 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 19:20:14 2008''
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Revision as of 09:38, 2 May 2008

Template:STRUCTURE 1cem

ENDOGLUCANASE A (CELA) CATALYTIC CORE, RESIDUES 33-395


Overview

BACKGROUND. Cellulases, which catalyze the hydrolysis of glycosidic bonds in cellulose, can be classified into several different protein families. Endoglucanase CelA is a member of glycosyl hydrolase family 8, a family for which no structural information was previously available. RESULTS. The crystal structure of CelA was determined by multiple isomorphous replacement and refined to 1.65 A resolution. The protein folds into a regular (alpha/alpha)6 barrel formed by six inner and six outer alpha helices. Cello-oligosaccharides bind to an acidic cleft containing at least five D-glucosyl-binding subsites (A-E) such that the scissile glycosidic linkage lies between subsites C and D. The strictly conserved residue Glu95, which occupies the center of the substrate-binding cleft and is hydrogen bonded to the glycosidic oxygen, has been assigned the catalytic role of proton donor. CONCLUSIONS. The present analysis provides a basis for modeling homologous family 8 cellulases. The architecture of the active-site cleft, presenting at least five glucosyl-binding subsites, explains why family 8 cellulases cleave cello-oligosaccharide polymers that are at least five D-glycosyl subunits long. Furthermore, the structure of CelA allows comparison with (alpha/alpha)6 barrel glycosidases that are not related in sequence, suggesting a possible, albeit distant, evolutionary relationship between different families of glycosyl hydrolases.

About this Structure

1CEM is a Single protein structure of sequence from Clostridium thermocellum. Full crystallographic information is available from OCA.

Reference

The crystal structure of endoglucanase CelA, a family 8 glycosyl hydrolase from Clostridium thermocellum., Alzari PM, Souchon H, Dominguez R, Structure. 1996 Mar 15;4(3):265-75. PMID:8805535 Page seeded by OCA on Fri May 2 12:38:56 2008

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