P0DTD8
From Proteopedia
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(P0DTD8 (SARS-CoV-2 Protein) Structure created through Homology modelling) |
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==P0DTD8 (SARS-CoV-2 Protein) Structure== | ==P0DTD8 (SARS-CoV-2 Protein) Structure== | ||
<Structure load='RXrfP0DTD8.pdb' size='350' frame='true' align='right' caption='SARS-CoV-2 Protein modelled using RaptorX and refined through Galaxy' scene='Insert optional scene name here' /> | <Structure load='RXrfP0DTD8.pdb' size='350' frame='true' align='right' caption='SARS-CoV-2 Protein modelled using RaptorX and refined through Galaxy' scene='Insert optional scene name here' /> | ||
| - | This model was made using Raptor X and refined using | + | This model was made using Raptor X and refined using Galaxy. The use of JSmol in Proteopedia <ref>DOI 10.1002/ijch.201300024</ref> and the article describing Jmol <ref>PMID:21638687</ref>. |
== Function == | == Function == | ||
Current revision
Contents |
P0DTD8 (SARS-CoV-2 Protein) Structure
|
This model was made using Raptor X and refined using Galaxy. The use of JSmol in Proteopedia [1] and the article describing Jmol [2].
Function
Unknown
Disease
COVID-19
Source Database
UniProt
accession: P0DTD8
Gene Name: ORF7b
Amino Acid Length: 43
Physiochemical Characteristics
Percentage of polar amino acides:27.907
percentage of non-polar amino acides:
Theoretical Iso-electric pH:4.17
Molecular Weight:51.8027 KDa
Hydrophob/Hydrophil Index:1.87
Homology Modelling
SWISSModel
RaptorX (Used model)
GalaxyWeb
LOMETS
IntFold
I-Tasser
References
- ↑ Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
- ↑ Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644
